FMO06889.5prime Sequence
1123 bp (911 high quality bases) assembled on 2008-10-01
> FMO06889.5prime
CAGTCGACATGAGTGCCAAGAGCAGGAGACCTGGCACCGGCAGCAGCCAG
ACGCCAAACGAGTGCGTCCAGGTGGTGGTCCGATGCAGGCCCATGAGCAA
CAGAGAACGCTCGGAAAGATCGCCGGAGGTGGTCAACGTGTATCCGAATC
GAGGCGTTGTGGAGCTGCAGAATGTGGTCGATGGCAATAAGGAGCAGCGC
AAGGTTTTCACCTACGATGCCGCCTATGATGCGAGTGCAACGCAGACGAC
GCTCTACCATGAAGTGGTCTTTCCCCTAGTCAGTTCCGTTTTGGAGGGAT
TCAACGGATGTATATTTGCCTATGGACAAACGGGCACTGGTAAAACCTTC
ACAATGGAGGGAGTACGCGGAAATGACGAACTGATGGGCATAATACCGCG
CACATTCGAACAGATCTGGCTGCACATTAATCGCACCGAGAATTTCCAGT
TTCTGGTCGATGTATCCTACCTAGAGATTTATATGGAGGAGCTGCGCGAT
CTGCTAAAGCCCAACTCTAAGCATTTGGAGGTGCGGGAACGTGGATCGGG
CGTTTATGTGCCCAATCTGCACGCCATTAACTGCAAGAGTGTCGAAGATA
TGATCAAAGTGATGCAGGTGGGCAACAAGAACCGCACAGTGGGATTCACC
AACATGAATGAGCATAGTTCAAGATCCCACGCCATTTTCATGATCAAAAT
CGAGATGTGCGATACGGAAACGAACACCATCAAAGTGGGCAAACTGAATC
TCATCGATTTGGCGGGCAGTGAGCGGCAGTCCAAGACAGGAGCATTCAGC
GGAGCGGCCTAAAGGAAGCAGCAAGATTAATCTGGCACTCTCGTCGCTGG
CAACGTGATCTCCGCCCTGCCGAAGTTCGCCTCATGTTCCGTATCGTGAC
TCAAGCTGACGCGATGTTGCAGGATCGTTGGGGGCCAATTCAAGACCATT
ATGAATTGCAACATGGAACCATCAATACAATTATTAAGAAACGCTTACAA
CGCTGCGAGTAGCCTTCCCGGGCCAGTCCTCCAGATCAGCCGATTAAGAT
GAGGATCCCAGGAAGCCAGTGTAAGGAGTACCAGAAGAAATTGAGCGACT
CAGCGGCTATAAGGTCGCACACA
FMO06889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2971 | CG7293-RB | 158..1280 | 9..1116 | 4820 | 96.5 | Plus |
| Klp68D-RA | 2998 | CG7293-RA | 185..1307 | 9..1116 | 4820 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11795957..11796621 | 9..673 | 3325 | 100 | Plus |
| 3L | 28110227 | 3L | 11796725..11797169 | 672..1102 | 1015 | 90.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:58 has no hits.
FMO06889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:10 Download gff for
FMO06889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1313 | 6..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:23:24 Download gff for
FMO06889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 186..1317 | 6..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:43 Download gff for
FMO06889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1313 | 6..1122 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:43 Download gff for
FMO06889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11795954..11796621 | 6..673 | 99 | -> | Plus |
| 3L | 11796727..11797190 | 674..1122 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:10 Download gff for
FMO06889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11789054..11789721 | 6..673 | 99 | -> | Plus |
| arm_3L | 11789827..11790290 | 674..1122 | 91 | | Plus |
