Clone FMO06902 Report

Search the DGRC for FMO06902

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:69
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10428-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06902.5prime Sequence

1147 bp (1012 high quality bases) assembled on 2008-10-01

> FMO06902.5prime
CAGTCGACATGGATCAGTTGTACCTGGAGATCGAGATCAGCACTCAAAAA
GAGACCACCATTTATACTGGTGTGTCCTCGTTCTTGGCTTTGTTTACTTA
CAAATTTTTGAAAGATCCCAAAAATGTGCGAGTAAACTTCGTTTCCACAA
AGATCGAAGGCGGTAAAATAGCTTTACGGAGTTCCCAACTCAAAAAGGAA
CTGACCGACCGGCACATCACATGCAGGGATGCCGCATCCTTGCCTGCCAT
CCAGGATCTAAAACTTCCAATCTACGAGAAGGACGGAAATACATTCATAG
CAGGAACGTGTGCCGTTTGCCGAGAGCTTATTGCAAGACAACCAAATGAG
GAACTCAAGAAACTTTTAGGCTTTAAGGGAAGCTGCCTCTTGGCTCCGTC
AGAAGCATCGATTTGGACTAAGTTCTGTGAGGTGGATTTAGTGGCTGTTG
TCAGTAAACTTCATAGTGGGCAAGTTTTGGAATTCGTCCCCCAAGAAGTA
GTGAGGTTCGAGCAGCACATGAACGAACCGGTGAGGATGCATAACATCTA
TAAACAGGCCAGAGAGCAGGCCAATCAGACTGAGAATGGCGGCAAGGTCA
AGAGGAGAGAACGAGTGCAAATCAAGTGCACTACACCTAAGGAAGAGCTG
CTTATTGAGCACCGCTTCGCCGAGGGCATCAGTTTCACAATTGCGGATAT
AATTTTGTACCCCCTTTTGAGAATTGTCTTCCAACATTGCGGGCAGATGC
TGCCCCATTTTCCACTCACTAGTACCTGGTTCAGCGAGATCGACTCTTTC
GGCGATAAATGCGCCAGGGTTCTAGAGATCTTTATGTGCCGCAAGCAATT
AAGACCCCTCCCGGAGAACTGGGAATCCCGGACTGCGAGGCCAACAGTCT
GTACAAAGCCGATCCCAAGCGATACAAGCAAGAAATCGGATTTACCCTAG
TCAGTTGGAGTTGGAAGCGCTCTAAGTAAGCTTTCCTCGCTGCACTGCAT
TTAATTCGATTCGGAGCAACCTATGCCAGCGCTGATCGACTGGAAGCAAT
TGAGCCCACTCATGCTTAAAGTCCGCGCTGCCAGGATGAACTCAGCCATG
AGGCATCAGCTTAGAGACTTGCCATGCGGTTGTTTCCTTGGCTCAAC

FMO06902.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10428-RA 1921 CG10428-RA 115..1270 9..1147 5095 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18949428..18949894 322..788 2335 100 Plus
2L 23513712 2L 18949945..18950234 787..1066 875 94.8 Plus
2L 23513712 2L 18949200..18949372 150..322 865 100 Plus
2L 23513712 2L 18948998..18949141 9..152 720 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:51:50 has no hits.

FMO06902.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:51 Download gff for FMO06902.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10428-RA 115..1199 9..1082 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:38 Download gff for FMO06902.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10428-RA 102..1186 9..1082 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:24 Download gff for FMO06902.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10428-RA 115..1199 9..1082 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:24 Download gff for FMO06902.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18948998..18949141 9..152 100 -> Plus
2L 18949203..18949372 153..322 100 -> Plus
2L 18949429..18949894 323..788 100 -> Plus
2L 18949947..18950251 789..1082 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:51 Download gff for FMO06902.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18949203..18949372 153..322 100 -> Plus
arm_2L 18948998..18949141 9..152 100 -> Plus
arm_2L 18949429..18949894 323..788 100 -> Plus
arm_2L 18949947..18950251 789..1082 93   Plus