FMO06906.5prime Sequence
963 bp (847 high quality bases) assembled on 2008-10-01
> FMO06906.5prime
CAGTCGACATGATGCAAATCCCATTTACTCGGATTTTCAAAGTAATTTTC
GTGCTCTCAACAATTGTCGCCGTCACAGATTGTTGTTCGAGCCGAATCTT
ACTTCTCCGAGAGCATACGCTGAAAATTGTGCAGCATCAGCACAGCCACA
TGCACGAGCATGCGCACGAGCTGCAGCAGCAGATCCAGGAGACCGCGGTT
GAGTTGCTCAATCGCCTGGAGCTGCAGCGCAAGCAACTGGAGGCCTCGGC
CCAGGAGGAGGCAGACCAGCTGCATCCCGATACGGATCCCAATCCGGACT
CGGGCGGCCAACTGCCAAACGCAGACGACTCCATTGCTGCGGATCCGGAA
CAGGATGGGATAATTCTCGGATCCAGTACCGACACCTGGTTGGCCAGCGA
AAGCAGCACACCAATCACTGATTCCGAGACAGTGACCACACCCGAAACTG
TTACCCACACCGGAGAACCGCCACCTGACCCCAGTTCGTCCAGCACGCCT
GACTCCACGACTCCCAGCCCGAACGACAAGGAGACAGAGATTCAGATGCT
GCCCTGCAGCGAAGCTTACAATACTAGCTTTTGCCTGAACGGCGGCCACT
GCTTCCAGCATCCGATGGTGAACAACACAGTCTTCCATTCCTGCCTCTGC
GTTAACGACTACGATGGAGAGCGGTGCGCCTACAAGAGCTGGAATGGTGA
CTACATCTATTCGCCCTCCAACAGCGCAGCGGAAAGTCCGAATGGCGCAC
ATCGTCTTTCTCCTTTTCCCGTACTCCTCATGCTTGTCGTCGCTCTACGT
TCTCTTCACAGCCCGTTTTCATGCTCCGCAATGTGCCGGATTATCGCCGG
GAGGCAGCAGCAACTACACCTGCATAAGCAGCGCTTTTTTTGTCAGATGC
GCATGCTTTCTAGACCATGCGTTTGCGCGCGGGCCAGGTAAGTGGTCATT
ATCCTAATCATAA
FMO06906.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| grk-RA | 1718 | CG17610-RA | 375..1259 | 9..900 | 4225 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8431875..8432497 | 698..76 | 3100 | 99.8 | Minus |
| 2L | 23513712 | 2L | 8431554..8431742 | 890..696 | 630 | 95.4 | Minus |
| 2L | 23513712 | 2L | 8433013..8433082 | 78..9 | 350 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2419 | 131..181 | 119 | 75 | Plus |
FMO06906.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:29 Download gff for
FMO06906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grk-RA | 371..1267 | 4..909 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:29:48 Download gff for
FMO06906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grk-RA | 371..1267 | 4..909 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:52 Download gff for
FMO06906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| grk-RA | 371..1267 | 4..909 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:52 Download gff for
FMO06906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8433013..8433086 | 4..78 | 97 | | Minus |
| 2L | 8431554..8431741 | 697..890 | 95 | <- | Minus |
| 2L | 8431877..8432494 | 79..696 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:29 Download gff for
FMO06906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8431554..8431741 | 697..890 | 95 | <- | Minus |
| arm_2L | 8431877..8432494 | 79..696 | 99 | <- | Minus |
| arm_2L | 8433013..8433086 | 4..78 | 97 | | Minus |
