FMO06910.5prime Sequence
926 bp (868 high quality bases) assembled on 2008-10-01
> FMO06910.5prime
CAGTCGACATGGCGACCGCCGCCTGCGTCCGCTGCGCCCAACAACAACAA
CAGAAGCAACAACAACATGCGGCGCATGCGCAGCAGCAGCAGCGACGCAA
CAGCCCGCGGATTCTGCACATTTACTGCGCGTGGGCGTTGATCACTCTGT
TGGCCGCCAGTGCCGCCATGGTCCAAAGTGCAGCGGTATTCGGCGATCTG
CTGTCCCATCCCACTTTCAAGCCACTATGCAGCGCTCAGCACGAGCATTT
CATCGAGAGCGATGGCAAAGAATCTAGTCTCATCATCGAACTGAAGCCGG
GACTCTATGGGGCGGAGCACGCCTCCTGTTCCCGCATCCTGAGTGCCCCG
CCCAACTATGGATTCATAGTGCGCCTCATCCTGCCAAAGCTGCCGCACGG
TCAGCCGTTGGATGCGGCCACCACCAGAAGTCCCCCCACGAACATCATGG
CTGCCGCAGCCGGAGGCAACAACTCGTCCAAACTCCGGCGCACTGGCAAG
TCCGGCGAAATGACAACTGACTCCTCGGAGCCACTCAACACGACGAGGGC
CATCGTCTCATCGGCGCCTACGCGGTTGTTGGGACGCACCTGCCCTCTGA
ACATATTTAGCTCGCTCGATCCGCACACGGCACAGTGGCGAGTGGATCCC
TGCCAGCTGGAGGACACTGCCTCCGAGATGGAGGATCCGGTGCGGCTCTT
TTCATGGCCGCGTCAAGATCGTCTGGGAACATGGCCAGCACGCCTTCCGA
TCCAAACTGATTGGTCACGGTGCTGGGCAAGGGCGAGCATTGCAAGGATG
ATGCCAAGCACCAGTGCTTTGAAGATCGGTGATGAACCCCATTCTGTGCA
TCTCCAAGAGCTGTCTTTGCAACGGAATCCGCCATTGGTCGTACAGAACA
ATACAAAAGCGATGAGGACTACAGCT
FMO06910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8180-RC | 2563 | CG8180-RC | 416..1329 | 7..922 | 4185 | 97.6 | Plus |
| CG8180-RB | 2324 | CG8180-RB | 416..1329 | 7..922 | 4185 | 97.6 | Plus |
| CG8180-RA | 2273 | CG8180-RA | 416..1329 | 7..922 | 4185 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15475941..15476354 | 605..192 | 2070 | 100 | Minus |
| 2R | 25286936 | 2R | 15482233..15482419 | 193..7 | 935 | 100 | Minus |
| 2R | 25286936 | 2R | 15473894..15474105 | 819..606 | 880 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:48 has no hits.
FMO06910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:19:10 Download gff for
FMO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8180-RA | 409..1334 | 1..926 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:22:56 Download gff for
FMO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8180-RA | 408..1333 | 1..926 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:18 Download gff for
FMO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8180-RA | 409..1334 | 1..926 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:18 Download gff for
FMO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15473885..15474105 | 606..829 | 96 | <- | Minus |
| 2R | 15475941..15476353 | 193..605 | 100 | <- | Minus |
| 2R | 15482234..15482423 | 1..192 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:19:10 Download gff for
FMO06910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11361390..11361610 | 606..829 | 96 | <- | Minus |
| arm_2R | 11363446..11363858 | 193..605 | 100 | <- | Minus |
| arm_2R | 11369739..11369928 | 1..192 | 98 | | Minus |
