FMO06912.5prime Sequence
1046 bp (887 high quality bases) assembled on 2008-10-01
> FMO06912.5prime
CAGTCGACATGCCGCGACGCTATCAAACAGCTCTCAATTCGGCCAAATAC
AGTGCCCAGGTCAAGACCAAAACTAGTGACAACGAATCCGATTCCGAAGA
TGATCTTCCGCCGGATCAAGATGCTGAGGATAACAATGAGCCAGATAATC
TGCGCAGCATTTTGGAAAATGCGCCGCACTTCTCTTATCCCGGCTTGAAC
ACTGGAATGTTGGGCCAACTCTTGTACGATCATCAGGATAATCCGAAGCA
GGACTTGCCAAATTGCTCGGTTACGGTGCCGCTACCCCTCTTCCTGGCAA
AGGATGGACAAACTCCCCGAGTGGAGGCATGCGTCCAAAGGCCATTCCGC
TACGACGATTGGACACGGCAATTGCAATTAGGCAAGGCTATATTTGATAG
GCGACTTAAAAATATGAGACAGCGTGTACAGAAGCAGGAGCAAGGTGTAC
ACGATGCCAGTCTGTTTGAGATGGCTGAGCACATAGCCCAACAGGAGAAT
TCCTTCTTCAGGGACAGCTACGATTACTACTACACAGGCGGAAACCTAAA
ACACGATTCCGTTTGATGGAAACGATCAGCTGGCCATGCATGTCAGCGGT
AATAAGCTCAGAGATTTGCACTTTTCCCGAGATTATGGTGAGGCGGAGTT
TTGGCAACCATTGCATTCGGCTACGATAGAGGAATCCTCCAGCGAAGTCT
TTGAACTTCTTCCGCTCCACAATTTAAATCGCAGTCAAATGTTCCTGGCA
CGGTTGCTGAACGAGGTTTCCCTATACGAACTTAAATGCAAAGACGAACA
GGATTCGGATTCAGATTACGAACTCATTCGCCATTGCATGTTTAGCAGTT
AAGTAGCTCCTTTTAACAAGCGCTGCACAATCATTGGCCATCCCTCCCCT
CGCTGCTCTAGATAGGTCTTTGCGCTCGTGGATATTTCGACACACAAGAA
TATAGCCAAGCTGATGTTGCTTGCTAAGGACTGAGAACCTCGAGTACTGG
CACAGTAAAGCAGCAGAGAAAGCACTTTCCTGCCTAACCAAGCAGT
FMO06912.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAF1C-like-RA | 2753 | CG10496-RA | 109..1162 | 7..1038 | 4515 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21500666..21501548 | 890..6 | 4295 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:42 has no hits.
FMO06912.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:19:06 Download gff for
FMO06912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10496-RA | 103..1167 | 1..1043 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:22:51 Download gff for
FMO06912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10496-RA | 341..1405 | 1..1043 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:16 Download gff for
FMO06912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TAF1C-like-RA | 103..1167 | 1..1043 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:16 Download gff for
FMO06912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21500489..21501550 | 1..1043 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:19:06 Download gff for
FMO06912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17387994..17389055 | 1..1043 | 96 | | Minus |
