FMO06915.5prime Sequence
1171 bp (1070 high quality bases) assembled on 2008-10-01
> FMO06915.5prime
CAGTCGACATGGCCAAGCGCTTTTCTGCCATGAAAGACTTCGCGCGGTGC
AAGAAACCGCGCCTGGATGTTAGCGTTACCCGCGGATCAGCGCGACCCAG
TCCACCGAGGAACAATTTCGATGGGATTCTCTGGGACGACGATGACGATG
TCATCCTGATGGCCACCCAGCTGGCGGAGGCGGAAATCGAGGCGGAGGAG
CGGAAAAAGAAGGGCGGAACAGAGGTGGACATCGGCAACAGCGAGGTCAC
CTTCAGCGAATTTGCACCCACTTTTCAGGGCTCAACCAGCACACAGCAAA
TGTTTCCGCCGCCACCGCCGCCACAAAAGAAGCCTACTTCCCTGGATATG
GATGCGATTTTCGCGGATGATGATGATTTCGATTTTCTGGCCGTTACCCT
CATGGACAGTGAGCCACAAAAGATGCCGGAGCCGAAGACCAGCACAAGTA
GGATAACTACCAGCAGCATAAGTGTTCAGCAGAAAACCACGACCACGACG
ACCATCAATGCCACGCAATCCCGCCAGCAGGAGCATCAGCTAAAGTTTCT
CATGGATAGGATTGAAGCCCTTAAGCGGGAAAACGCGCAGCTGGAAAAGA
ATTTGGGCGACAGTAAGGAACGCAATGAGATCAAGTCTGGTGAGGTTTCC
TTACTTCGTGATGAGCTGAAGCACTTGCGCCAGCAGCTGCAGGCTAGCAA
AATGGAAAAGCTGGCTTTGGCCGACGAAACGAATCGGGATTGCAACAAAA
AGTGGCAGAAGCGGCCAAACAAATTGCGGCCAAGGACATCGAGTTGAAGA
TTAAGAACGCCGAGTTCTCAAAGTTGAAGACACAGCAAAAAGCCCATGAA
AGAAGCATGAATTCCAGCATGAGCATTTTACAGGCTGCTCCAGATCCTTT
GGAGAAACGCTTATCACTCGCTTGAATAGGCTAACATACACAGATCTGTG
CCCGGGCTGAAAACCGATAATGGCAGTGTGTTCGAATACAGCGAAATGAG
GATCAGACTAGGAAACGAAGAATCATTTTGGACTGGAATTAAAGCAACTG
CTACTTCATTACGCCTCGGCTTGCAGGCAAGCCGGATCTGGTGAATAGCT
CCTGCCAAGAATATCTCCTCGGTCGGGTCCGGCAAGGATATCCGAAGTTG
GCTCTCTAATGCTCAAGTGGA
FMO06915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mus304-RA | 2816 | CG7347-RA | 101..1225 | 8..1126 | 5265 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18109914..18110552 | 8..646 | 3195 | 100 | Plus |
| 3L | 28110227 | 3L | 18110628..18111054 | 643..1064 | 1855 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:33 has no hits.
FMO06915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:06 Download gff for
FMO06915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus304-RA | 101..1230 | 8..1137 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:22:46 Download gff for
FMO06915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus304-RA | 86..1215 | 8..1137 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:29 Download gff for
FMO06915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mus304-RA | 101..1230 | 8..1137 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:29 Download gff for
FMO06915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18109914..18110550 | 8..644 | 100 | -> | Plus |
| 3L | 18110630..18111122 | 645..1137 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:06 Download gff for
FMO06915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18103014..18103650 | 8..644 | 100 | -> | Plus |
| arm_3L | 18103730..18104222 | 645..1137 | 96 | | Plus |
