FMO06920.5prime Sequence
1170 bp (1045 high quality bases) assembled on 2008-10-01
> FMO06920.5prime
CAGTCGACATGTCGAAAGCAGGCGAAGATCAGCCCGCAGCAGAGGGTGCG
GTGATTGCGGGCAATGGTAACGCTGAGCTGGCCCAAAATGAAGGCCAGAA
TGAGCAACAACAACCCCCGCCGAATCAGCCCACCCGCATGGAGTCCTTCT
TTGCGATGACCAAGTCCCTCATCCTGCGTGCCCTGATCATCTACTTTGTG
AGCTCCTTTTTCCGACGACCTGCGCCCGATGCCGCCAGTCAAGGCAAAAG
TGTCGCTAATGCGGGTCCCAAGATCACGGCCTGGAATTACTTCGAGAACG
GCACGGACTTTGACCTGCACGTGTGGTTGTCGGAGAATCCCGATGTGGTT
AACTTCCAGCAAAAGGCGAATCTCCTCTGGCTACAGAAGGACCTCACCTA
TGGCGATTGGACGTCGGGCGTCAACGGAGATGGCATTTACACGCACAGTT
TGAAGCTTAAGACCAGCCAGCATCTGATGAACAATGGCAGTGTGTACCTA
CATGCCTTTGTCACGCGTACCGGCATGAGTCCCGATCCCAAAGCCCCGAA
TTACGCCACCAAAATGGGCCACCAGCAACATCAGCTGAACAAGTTCAAGA
AGTTGCGTGTGAACCGCAACTACAACTTGCTGGCCAGCGAGAAGGAGAAG
TTGGAGCACGAGCTCAAGCATGCGAATCTCAAGGATACCATCGTGTCTCA
CTGGCATCCTAATCTCACGGTCAATCTCGTAGTGGACCAAACTAACTGGG
CCGAGGGATCTGTGCCGCCGCCACTGGATGACTACGTAAAGTTCGTAGAC
GGCGGTAAGACCTATCTGCCCATCCTGTTCGTCAACGACTACTGGAATCT
TCAGCGGAGTATCAACCCATTAATGAGACCACTCCCGAACTGGAGCTGCA
CCCTCACTTCCAGCCGCTGGGCATGTTCAAGTGGCAGCTGTATGCCGCCA
ACAGATGAAGAACAAGTGGGCTGGCATATGCTCGGCGAGCTGATGCCGCC
AGCCAGCCGGAGGAGAAGTGACGAGGATCAGGACTCGCTGAAGGAAATTC
TGCTGACACAATATCTACCTGCTGGGCCATCACAGTGCCGTTCATACTGC
AATCCGGTGTTCGAAACTGCCTGACTTCAAGAACGACATCAGTCTGGACA
CATCCAAGTTCGTCGAGGAC
FMO06920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3702-RB | 2252 | CG3702-RB | 92..1239 | 8..1148 | 5245 | 97.9 | Plus |
CG3702-RA | 2369 | CG3702-RA | 209..1356 | 8..1148 | 5245 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4225736..4226768 | 1077..50 | 4700 | 98.5 | Minus |
2L | 23513712 | 2L | 4226845..4226889 | 52..8 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:23 has no hits.
FMO06920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:13 Download gff for
FMO06920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3702-RA | 204..1368 | 1..1159 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:36 Download gff for
FMO06920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3702-RA | 204..1368 | 1..1159 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:42 Download gff for
FMO06920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3702-RA | 204..1368 | 1..1159 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:42 Download gff for
FMO06920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4225651..4226767 | 51..1159 | 97 | <- | Minus |
2L | 4226847..4226894 | 1..50 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:13 Download gff for
FMO06920.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4225651..4226767 | 51..1159 | 97 | <- | Minus |
arm_2L | 4226847..4226894 | 1..50 | 94 | | Minus |