FMO06922.5prime Sequence
835 bp (833 high quality bases) assembled on 2008-10-01
> FMO06922.5prime
CAGTCGACATGTTCGCTTTGTGGTATTTAACTTTTGCTGTCGATGAAATA
CGCAAACGTTTAGCTTGGTTATTTAGTTCTAACAAGCCAGCAGCGCCTGC
GCTCGACAACAAGCCAGCGAATCCAGCTCCCGCCAAGGAATCAGCACCAG
CTCCTGCACCTGCTCCAACTCCAAAGCCCGCTGTAGTACCACCTGCTCCT
AAACCAGATCCCCCAAAACCAGCGCCAGCGGTAGCCAAACCCACTCCGGT
TCCAGTTCCTGCGACAGCTCCCGCTCCACCGAAGGAAGAACCTGCTCCAA
AGCCCAAACCGGAACCTGTGCCATCACCCGTAGTTGCCCCGCCAAAACCA
ACTCCTCCCCCAGCCAAGCCCAGCAGTCCGCCAAAACAAGCCGACAAGAT
GCCGATCCCACTGCCAAAATCCTTGACAGAGGCCAATACCAATGGCCAAA
ATGGCAATGCCGCCAATGGCGGTAATGTGGATGAACTGGTGTTCGGTGGC
CAGCAGGCCGAGAAGGTGCTTCCAGCGGCCAAGGAGGCCAGCAATGACTT
CATCAAGGGCGAGACCAATGCCTTCATCCAGTCGATTAAGGAGGCTCAAC
AGTTGGGCGAGCGCAAACAAGACACCATGGTTGATGCCGCTGTTCTCGCT
AAACTGGAGGAGGGTTATGCCAAGTTGGCTGCCTCCCGACTCCAAGTCGC
TGTTGAAGAGTACCTGACCAAGGAGGTCTTCGACAACTCGAAAGACAAGG
TCACGCCCACCTTCAAGTCGACCCTGCTGGATGTGATCCAGTCTGGCCTG
AGAACCACAATTCCGGGCGTCGGCATCTACGCTCT
FMO06922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Argk-RA | 2415 | CG32031-RA | 331..1156 | 9..834 | 3965 | 98.9 | Plus |
| Argk-RB | 2246 | CG32031-RB | 137..919 | 52..834 | 3750 | 98.9 | Plus |
| Argk-RE | 1854 | CG32031-RE | 373..595 | 612..834 | 950 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9061907..9062468 | 613..52 | 2810 | 100 | Minus |
| 3L | 28110227 | 3L | 9050139..9050360 | 834..613 | 845 | 96 | Minus |
| 3L | 28110227 | 3L | 9064464..9064507 | 52..9 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:03 has no hits.
FMO06922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:15 Download gff for
FMO06922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Argk-RA | 331..1156 | 9..835 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:27 Download gff for
FMO06922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Argk-RA | 331..1156 | 9..835 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:19 Download gff for
FMO06922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Argk-RA | 331..1156 | 9..835 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:19 Download gff for
FMO06922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9050138..9050359 | 614..835 | 95 | <- | Minus |
| 3L | 9061907..9062467 | 53..613 | 100 | <- | Minus |
| 3L | 9064464..9064507 | 9..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:15 Download gff for
FMO06922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9043238..9043459 | 614..835 | 95 | <- | Minus |
| arm_3L | 9055007..9055567 | 53..613 | 100 | <- | Minus |
| arm_3L | 9057564..9057607 | 9..52 | 100 | | Minus |
