FMO06924.5prime Sequence
1060 bp (996 high quality bases) assembled on 2008-10-01
> FMO06924.5prime
CAGTCGACATGATCCACGTCGGCGAGAACTCGTGGAATCTGCGGATCTTC
ATCACGGATCTGGCGCTGGAGAAGACGATGCGCGTGCGCGGTGACCAGCA
CATTGGGGGCATTATGCTGCAACTGGTGGATCCGGAGAATCCCAAGGACT
GGTCGGATCATGCTCTGTGGTGGCCAGCGCGGAATGTTTGGCTCAGCCGA
ACCAAACTTACCCTGGATCAGTGCGGTGTCCAGGCGGATAGCCTTCTGCA
CTTCACGCCCATGCACAAGATACTGCGGGTGCAGCTGCCGGATTTGAGGT
ACCTGGACTCCCGGGTGGATTACTCCGTAAAGACGTTCTCGGCGGTGGTT
AATCTATGCAAGCAGTTGGATATCCGCTATCCGGAGGAGTTGTCCCTGTG
CAAACCACTGGAAGCGGAGCACCTGAAGCGTAACTTCGCCCAGGTGCCGC
ATCAGAAGCGAGTGCCAATCGCTGAACCAGATGGCACCACTTACCTGCAG
CCTGCTGCGGACACCAACTCATTTGTGCCCATCAGCACGTCGTTTCATGG
AGAAGGCGGAAGCACGGGCAGTCTGGACAAGCCCTCTGCACCGGGATCCT
TCTTCTGTGCTCCTCTGTCGCCGCACAATCACCGAGCGCGCTCGCCAGTG
CGCACCGTATCACCTTTTCCAGGCACCTGGAAACAGAGCCAGCTTGGCTA
TGCCACGTACGATTCGAGCTCCTCAAGTCTTGGCGATTTCCAGGAGAATT
TGGCCAGCTCTCCGCCCACCCCATGCGCGGATGTGCGAGCTCTTCAGCTG
CGCCCCAAGTCGCTGGTGGAGAAAGGCTCGTCTGAATGTGGGCTGGCCTA
GATTCCTCGCTGTCCATCATGGAACAGGCATACGCGAGTACGACACGCTG
TGCCTGCGCTTCAGCGCTGTCACTTTTTCGATCTAAATCCAAGTGCGACC
AGTGCGCATCATCAGCTGTACGAGCAGCCAGTGGATGTTCTGAACGAGGA
GTGATTGCACAGAGAAGAAAGGCCTTATGTGCGCTCAGTCAAGGTGACCA
CACGTAAATC
FMO06924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fit2-RA | 2790 | CG7729-RA | 330..1360 | 8..1030 | 4740 | 98 | Plus |
| Fit1-RB | 3469 | CG14991-RB | 613..1135 | 9..534 | 620 | 75.4 | Plus |
| Fit1-RA | 3119 | CG14991-RA | 697..1219 | 9..534 | 620 | 75.4 | Plus |
| Fit1-RB | 3469 | CG14991-RB | 1393..1568 | 804..976 | 235 | 78.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17024657..17025687 | 8..1030 | 4485 | 97.9 | Plus |
| 3L | 28110227 | 3L | 4104260..4104702 | 9..451 | 610 | 75.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:07:43 has no hits.
FMO06924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:12 Download gff for
FMO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fit2-RA | 324..1360 | 1..1030 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:04 Download gff for
FMO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fit2-RA | 322..1358 | 1..1030 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:52 Download gff for
FMO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fit2-RA | 324..1360 | 1..1030 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:52 Download gff for
FMO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17024651..17025687 | 1..1030 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:12 Download gff for
FMO06924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17017751..17018787 | 1..1030 | 97 | | Plus |
