FMO06925.5prime Sequence
880 bp (880 high quality bases) assembled on 2008-10-01
> FMO06925.5prime
CAGTCGACATGGAGAGCGAGAAGATTCTAATGGCCGCCGGAGTGACGGTA
GCCGCCGTAGTCGGAGCCTTCGTTTTCTGGGGTCCTTCGGGTTCCCGTTT
GCGTCAACGACGCGGCCAAATTGCCGGTCTCCACAACTTTGGACTGACCT
GCTTCCTAAACACCCTGCTACAGGCGATGGCCGCCTGTCCCCAGTTCATT
GCCTGGCTGCAATTGTACAACAACGCCTCGCCGGATCGAAAAAGCTTAAT
TACGTCGATGTTAAACACTCTGGAAGTGGTCAATGGCACCCATGCCACTC
TGCGCGGCGATCCCTATTCACCGGGAGCCGTTCTCCGGGCTCTGAATGCC
CTGGGCTGGGTGATTCCACAGGAGGAGCACGACGCCCACGAGCTGTTCCA
CGTGCTATTGACCTGCCTGGAGGAGGAGGCCATACGACCACAGCCCCTCG
GCTGTCTGTCGGATGCTCTGCCCACGGATAACGATGATAACAGCAGCTTG
GCAGGCACAGCAACGCCAGTAGGGGGCTTTCGATCATTTAGCTCCATGGC
AGCGGGACTGGGAGCCAGCCAGAGGATCGGGGATCAACCGAACCGGCCCT
CCAGTGCCATGCTCACTGATTTCTTAAACATGGAGTATGATGAGAGCACC
AGTTTGCAGCGATTGGTGCGTTCCGAGGCCCACACACCGGATTCGCCTGC
CTCTGTTTGCGAACGCGACGGAAACGATCGCCTGGGATCCGTGCTTCTGG
ATGCCGTTTCGCCAAGGACACCCTTTTGGCTTTCCGCTCGTCAGCAATCC
GGATTCCCTTGGCTACCCTATGTTGGGCGGCGAGCGTTCCTCGCGACCGC
ACCTTCCACATTCCCAACAGCAGCAGGATG
FMO06925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3016-RB | 2267 | CG3016-RB | 160..1031 | 8..880 | 4220 | 99.1 | Plus |
| CG3016-RA | 2436 | CG3016-RA | 329..1200 | 8..880 | 4220 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5878534..5879323 | 880..90 | 3735 | 99 | Minus |
| X | 23542271 | X | 5879375..5879459 | 92..8 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:16 has no hits.
FMO06925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:57 Download gff for
FMO06925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3016-RA | 324..1200 | 1..880 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:53 Download gff for
FMO06925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3016-RA | 370..1246 | 1..880 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:48 Download gff for
FMO06925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3016-RA | 324..1200 | 1..880 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:48 Download gff for
FMO06925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5878534..5879322 | 91..880 | 98 | <- | Minus |
| X | 5879377..5879462 | 1..90 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:57 Download gff for
FMO06925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5773410..5773495 | 1..90 | 95 | | Minus |
| arm_X | 5772567..5773355 | 91..880 | 98 | <- | Minus |
