FMO06927.5prime Sequence
1067 bp (964 high quality bases) assembled on 2008-10-01
> FMO06927.5prime
CAGTCGACATGACGGGAACAGCGGCAGTGCGACTCAGCATTACGATACCC
ACGAAGGCGGAGGAGGAGCGCCTGAAGAAGGTGTACGTCCAGGTGGTCAA
TGGAGAGGTCGCCACGCCCATGGGTACCGCCAGCAGAACCTCAACCATTG
AAAGCTTATCGACCATTCGGATCGGGGAATCCCCGGAACGGCAGAGCCAC
AAAGTCCTAAATACCTTGCCAAAGATTGAAATTCAGACGTGCCACGATCA
GCTGCTTGATATCCCACTGGACACGGACCAGGAGCAGGTGGTGCGCCAGA
TCCTGCACAGATTTCACATACCCAATGCCGTTTGGCTGCCCAGTCTAGAG
GGTAATGCTTACCACATCAGCTTCTCCATGGACTTTGACGAACGCTACGA
GAATCTCTATGAGGCGCTGCAGGAATTCGGCATCGGTGATCGTGAGGGAT
CTACAGTATCCGTGGTCAGCTGCCTGGCCCACAGATCCTACGTTCAGCGT
GAGGATACGGAGGAGCAGGAGGACCAACCATCGAGCACAGAACACATCAA
TGCCCAGAAGCAGGGTATCTGGGATCGGTTCATGAACTCGGTGCGATCCC
GATTGAATGTGGCACAGATCGTAAGGGATGTGCGCCAGGATGCGGCTATT
ACCTTCGACTTTTTGCATACTCCTAGTTTCGGCGGCAGTTCTGGCGAGCT
TTGGCCTGGTGGAGAATAGCACGATTTTCCTGGCCTCCAGCATGCTCATT
TCCCCACTGATGGGTCCCATAATAGCGGCCATCTTTGGAACTGTGATCCA
GGATCGATCGCTCCGCAAGCTGGGCATGCTGAACGAACTGATTGGTATAC
TGACCGCCACACTGGTGGGTTTCCTATTCGGTCTGGTGTGTGCACACGGA
TCGCAATATGGCATGTGAGGAATGACGGAGAAAGCATCCCGCTGCATCTG
CACTCCTCTGCGTTGGGATTCACGGCCATACCGTCGGAACGCGGCTGCTC
TGAATCCGGGCGGAAATTGATCCTGTTGGCGTGGCCAATCGGACTCCGCA
CACGGCGGGGTACATCA
FMO06927.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7384-RA | 2261 | CG7384-RA | 216..1272 | 9..1042 | 4580 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10509706..10510238 | 541..9 | 2665 | 100 | Minus |
| 2L | 23513712 | 2L | 10509063..10509284 | 906..687 | 995 | 98.6 | Minus |
| 2L | 23513712 | 2L | 10509500..10509643 | 686..542 | 675 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:52:14 has no hits.
FMO06927.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:46 Download gff for
FMO06927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7384-RA | 209..1278 | 1..1049 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:48 Download gff for
FMO06927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7384-RA | 217..1286 | 1..1049 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:31 Download gff for
FMO06927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7384-RA | 209..1278 | 1..1049 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:31 Download gff for
FMO06927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10509500..10509643 | 542..686 | 99 | <- | Minus |
| 2L | 10509706..10510243 | 1..541 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:46 Download gff for
FMO06927.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10509500..10509643 | 542..686 | 99 | <- | Minus |
| arm_2L | 10509706..10510243 | 1..541 | 99 | | Minus |
