FMO06931.5prime Sequence
1151 bp (988 high quality bases) assembled on 2008-10-01
> FMO06931.5prime
CAGTCGACATGACTGCATTCGAAGAGTTTGGCGTGCTTCCGGAGCTGGGA
ATGGCCACAGACGAATTGGACTGGACCCTGCCCACCGATGTCCAGGCTGA
GGCCATTCCTCTGATCCTGGGTGGCGGCGATGTGCTGATGGCCGCCGAAA
CTGGTTCCGGAAAAACGGGTGCCTTCTGCCTCCCCATTCTGCAAATCGTG
TGGGAGACCTTGCGTGATCTGGAGGAGGGGAAGGCTGGCAAGGGCGGTGC
AATTGGAGGAGCTGTGACTCCGTGGACCATGTCCTTCTTCGACCGAGGAA
ACGCGCTTGCCGTCACTCCTGATGGTCTGCGTTGCCAGTCGCGGGAGTTC
AAGGAGTGGCACGGGTGTCGGGCCACCACTGGCGTTCGCGGAAAGGGCAA
GTTCTACTTTGAGGCCACGGTAACGGACGAGGGACTGTGTCGTGTGGGCT
GGTCTACACAGCAGGCAAACCTCGATTTGGGCACCTGTCGCATGGGCTTT
GGATTCGGCGGCACCGGCAAGAAGTCCAACAACCGCCAGTTTGATGACTA
CGGTGAGGCATTCGGCAAGGCAGATGTCATCGGCTGCCTGCTCGATTTGA
AAAACCAGGAAGTGAGCTTCACCAAGAATGGCCAGAACCTGGGCGTAGCC
TTCCGCCTGCCGGACAACCTTGCCAAGGAGACTTTTTACCCGGCGGTGGT
GCTGAAGAACGCCGAAATGCAGTTTACTTTGGAAAGACTGACTTCAAGTA
TGCCCCGGGTAACGGGTTTCGTTGGCGCTTGCCAGGCTGGACCCGAGCAT
AGCCAGGCCAATCCCGATAACCGGTCCCGCAGCTGGAGCACCGGTCCGCC
AAACCGGCGCCTAACGCCCCTCAGCCATTATCATGGAGCCCCAGCAGAGA
ATTGGGCCGAGCAAACCTACATCCAGATCGAGAAGTTTAAATACCACCTG
AGCAACCCAGAGGTTCGCTTCCTTGCTGCTTATCGTGGAGTGAGGTTGGG
AGAGCAAAGGGGCGTCTGATGCAGGCCTCTCCATAGTGGTGGGGCAGCCC
GGGCGGCTGGAGGAAATGATCAACAGTGAACTGGTCCTGCTTCACCCATT
GCCCTTTTTTGTTCTGGATGAAGCTTGAACGCCATCTGAGAACCAGTTCA
C
FMO06931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ddx1-RA | 2470 | CG9054-RA | 115..1230 | 9..1125 | 5035 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22263658..22264705 | 77..1125 | 4370 | 97.2 | Plus |
| 3L | 28110227 | 3L | 22263547..22263604 | 19..76 | 275 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:13 has no hits.
FMO06931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:06 Download gff for
FMO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ddx1-RA | 109..1243 | 1..1139 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:46 Download gff for
FMO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ddx1-RA | 109..1243 | 1..1139 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:22 Download gff for
FMO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ddx1-RA | 109..1243 | 1..1139 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:22 Download gff for
FMO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22263553..22263604 | 25..76 | 100 | -> | Plus |
| 3L | 22263658..22264718 | 77..1139 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:06 Download gff for
FMO06931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22256653..22256704 | 25..76 | 100 | -> | Plus |
| arm_3L | 22256758..22257818 | 77..1139 | 96 | | Plus |
