FMO06932.5prime Sequence
1046 bp (933 high quality bases) assembled on 2008-10-01
> FMO06932.5prime
CAGTCGACATGGTTCGATATATTCCGCTCCTACTCCTGGGAGTGCTGTGC
TCCTGGCCAGCTGCCACTGTGGCCAGTGACCAGGCTTCCCGCATCGTCTG
CTACTTTAGCAACTGGGCCGTGTATCGAACTGGAATCGGTCGCTATGGAT
TGGAGGATGTGCCCGCCGACCTGTGCACCCACATCATCTACTCCTTTATT
GGTGTTAACGATAAGAGCTGGGATGTGCTGGTGATCGATCCTGAGTTGGA
TGTGGATCAGGGTGGCTTCAGCAAGTTTACACAATTGAAGAAATCTAATC
CCAATGTGAAGCTCGAGATAGCAGTGGGTGGCTGGGCGGAAGGTGGCTCC
AAGTACTCACAAATGGTGGCTGTTCGCGATCGCCGGCAAAGTTTCATACG
CAGTGTGGTACGCTTTATGAAGCAGTACAACTTCGATGGATTCGACTTGG
ACTGGGAGTATCCGGGAGCCACGGATCGCGGTGGCAACTATGGGGATAAG
GACAAGTTCCTTTATTTTGTTGAGGAACTGCGACGTGCCTTCGATCGCGA
GGGTCGCGGATGGGAAATCACCATGGCGGTGCCCGTTGCCAAGTTCCGGC
TGAACGAAGGTTACCACGTTCCGGAATTGTGCGAAGCGCTGGATGCCATT
CACGCCATGACCTATGACCTGCGAGGAAACTGGGCCGGATTCGCCGATGT
GCACAGTCCACTCTATAAGCGAAAGCACGACCAATACGCCTACGAGAAAC
TGAATGTGAACGACGGCCTTGCGCTGTGGGAGGAGATGGGCTGCCCCGGC
CAACAGCTGGGTGGTGGGTGTTCCCTTCTACGGTCGGACGTTCACCGCTG
AGCAACTCGAACAGAACTAACACATGGGCACCTAACATCAATTAGGAGGC
GGGCGCGGAGCTCTGGGTCCCTACCCGAATGCCAGCGGCTTTCTGGCCTA
CTACTAATTTGCACCGAGGTGATGGACAGTCCAAGGCATTGACGTAGATT
GGGATGCCCTGGCTTGGTGCCCTCCCTTACATGCGACACCATGGGT
FMO06932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cht5-RA | 2122 | CG9307-RA | 131..1148 | 9..1023 | 4655 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13768091..13768713 | 12..634 | 3115 | 100 | Plus |
| 3R | 32079331 | 3R | 13769073..13769341 | 758..1023 | 670 | 90.8 | Plus |
| 3R | 32079331 | 3R | 13768861..13768984 | 635..758 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:37:39 has no hits.
FMO06932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:44 Download gff for
FMO06932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht5-RA | 122..1138 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:16 Download gff for
FMO06932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht5-RA | 120..1136 | 1..1013 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:04 Download gff for
FMO06932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht5-RA | 122..1138 | 1..1013 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:04 Download gff for
FMO06932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13768091..13768713 | 12..634 | 100 | -> | Plus |
| 3R | 13768861..13768984 | 635..758 | 100 | -> | Plus |
| 3R | 13769074..13769331 | 759..1013 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:44 Download gff for
FMO06932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9593813..9594435 | 12..634 | 100 | -> | Plus |
| arm_3R | 9594583..9594706 | 635..758 | 100 | -> | Plus |
| arm_3R | 9594796..9595053 | 759..1013 | 91 | | Plus |
