FMO06933.5prime Sequence
918 bp (918 high quality bases) assembled on 2008-10-01
> FMO06933.5prime
CAGTCGACATGAATGTTCCTCCTAGCGTGGGCAATGGAGGAGCGCCACCG
GGAAGGGGCATAGGCTACACGCCGCCCGGTGCAATCGTGCCGCAGTTTCC
ACCACCCGGATTTGGGGCCCCACCCCCACCGGAGCTGGCCGCCGCCTTCG
GGGTGATGGCCACCAGCACCGAGTGGACGGAGCACAAGGCGCCGGACGGA
CGACCATACTATTACAATCAGAACACGAAGCAAAGCTCGTGGGAGAAGCC
GGAGGCTCTGATGACGCCCGCCGAGCTGCTGCACAACCAGTGTCCCTGGA
AGGAGTATCGCTCGGATACGGGCAAAGTGTACTACCACAACGTGGCCACC
AAGGAGACCTGCTGGGAGCCGCCGCCGGAGTACGTGGATATGAAGGCCAA
GGCGAAGGCGGAAGAAGCTGCTGCAGCCGCCAAAGCCGTAGCAGCCATGA
CATCATCCAGCTTAGCCGGCATGGTGCCACCTGCTGCTCTGGCTAGTATT
CTTCCCGCTGCCCTGCCTGTTGCCCCCCGATTACCGACTCCTGAGATCCA
CTCGCCGCTGACACCCAGCAGCAACGAGAACTCGTCATCAGCGATGGATC
AGGCCATGGCCGCCACGTTAGCGGCTATAGAGGTGCCACAACAAAATGCT
AAGAAGGACGACAAGTCAGAGAGCGCTGTGGTGTTTAAGGATAAACGCGA
GGCCATCGAGTCCTTTAAAGAGCTGCTGCGGGACCGCAAATGTGCCATCA
AATGCGAACTGGGACCAGTGTGTGAAAATCATATCAAAGGATCCGCGATA
CGCAGCCTTCAAAATCTGAACGAGCGCAAGCAAACATTCAATGCCTACAG
ACGCAGAAGATTAAGGACGAGCGCGAGGAGTCCTCGCTTAAAACCCAGAA
GGCAAAAGAGGACTGGGA
FMO06933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3542-RA | 2906 | CG3542-RA | 163..1073 | 9..918 | 4410 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3023388..3023794 | 9..415 | 2035 | 100 | Plus |
| 2L | 23513712 | 2L | 3023854..3024090 | 416..652 | 1170 | 99.6 | Plus |
| 2L | 23513712 | 2L | 3024142..3024413 | 648..918 | 1090 | 97.4 | Plus |
Blast to na_te.dros performed 2014-11-28 23:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 1268..1298 | 603..633 | 110 | 83.9 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 2721..2751 | 603..633 | 110 | 83.9 | Plus |
FMO06933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:09 Download gff for
FMO06933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3542-RA | 156..1072 | 1..917 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:44 Download gff for
FMO06933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3542-RA | 147..1063 | 1..917 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:50 Download gff for
FMO06933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3542-RA | 156..1072 | 1..917 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:50 Download gff for
FMO06933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3023381..3023794 | 1..415 | 99 | -> | Plus |
| 2L | 3023854..3024086 | 416..648 | 100 | -> | Plus |
| 2L | 3024143..3024412 | 649..917 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:09 Download gff for
FMO06933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3023381..3023794 | 1..415 | 99 | -> | Plus |
| arm_2L | 3023854..3024086 | 416..648 | 100 | -> | Plus |
| arm_2L | 3024143..3024412 | 649..917 | 97 | | Plus |
