FMO06934.5prime Sequence
887 bp (859 high quality bases) assembled on 2008-10-01
> FMO06934.5prime
CAGTCGACATGCTGCACTCCGAATTATTGCCCCCCGCTGGCCACCAGGGC
ATCTATGCTCCACTAAGTCAGGCAATGAGCGATTCTGAATCCGACGAGGA
AATTGAGATCCACAACGCCGCCAATCATCGACAAAAATTGCAACAGAAAC
TTAAGCAAGCTCATCAGCCCAGTCCGCCGGAGCAGCTCCAAGCCCAAAGG
ATACGCATCCCGCCGAACACTCTAGCCCTGAAATCACCACATACGAGAGC
ATCTCCCACGGCCACCAGGATTGTGACTCGAAAACCTTCCGGGAGTACCC
AGAAATTCCAACTGGAGGGCAGTAGCTACGCTACCAATATGCAGAATACT
TTCCGTTCCGTCATGTTGAGCGATAATGGTGGAGTGGGATCGGAGTTGTC
CCACTTCAACAGTGATTTCGATGCGAATGCAGACAATGTAGCCATCTTGG
GGGACCATAATCAGACCGGCGAGGATTTGTCCAAAAGAACCCCCATGTCA
CCGGCAAGGAAATGCTGTTTCATAGGCAGCCTGCTCCTGTGCTTCCTCGC
CGTCGTATCCTTTGTATGGCTGGTGCCCTGCGGTAATCCTGATGGCACTG
GATCCTGTCCAGTCGTCGGAGACCGGATAAAAGACCCACAACTGGTTCAA
TAATTACACAAAGGCGGAACTTAAGGGAGGAATCAAATGTGGTCGGTGGT
CTAAGAGCCTGGGAGAACAACCTGATATTTATGTTCCGCGGGGGATGCCT
TTTTTCCCGGGAATTCCGACAGGTAAACGAGCGGCGTAAGGGCATCATCT
GTTTTGATTTGGTTCTCGGGGAGCTGTGCCTTGGTTTGTGGAGATGGGTT
GATGAACCTGTCGCCCCGGACTGCACCATCATAGACA
FMO06934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3618-RB | 2559 | CG3618-RB | 113..983 | 9..887 | 3985 | 97.6 | Plus |
| CG3618-RA | 2589 | CG3618-RA | 143..1013 | 9..887 | 3985 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20814929..20815799 | 887..9 | 3790 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:37 has no hits.
FMO06934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:20 Download gff for
FMO06934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 143..1012 | 9..886 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:59 Download gff for
FMO06934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 140..1009 | 9..886 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:17 Download gff for
FMO06934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 143..1012 | 9..886 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:17 Download gff for
FMO06934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20814930..20815807 | 1..886 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:20 Download gff for
FMO06934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20808030..20808907 | 1..886 | 97 | | Minus |
