FMO06945.5prime Sequence
965 bp (965 high quality bases) assembled on 2008-10-01
> FMO06945.5prime
CAGTCGACATGACGCACGTAAACAATGGGGAAGTAATGGAAAAGGAGATG
GAGCCAACGGGAGAGCGAGAGAGAGACAGGGAGACTGCTGCCGGCAGCGG
GGTCCATCATCGATTTTTAGCCAGTGCATCGGAGCGAGATGCCAATAGCG
GGAATGCATTGGAAGCTGCAGCGACAAAAACAAAAACAGGCACAACGATT
ACCAACTTGGAAGACTTGGCCTTTGAGGCATGCCAAAATTGGTCGGATTT
GCACCAAGACTTCTTCATCACGGACGATGAACTTGAGTACGAGGATGAAC
TCTCTTTGGGCAGCAGCATAGGTGGAAACATTGCAACAACAACGACAGCA
GATGCAGCAGTAGAGGGTCTTATAACGGGAGAACATCAGAACGAGCAGCT
GCTGATGGAAGTTCTATGCGGCAACCGCGTTAGCCAAATGACTCGGGCGT
ACGATGACATTGAGGCCGTGACGCGACTGCTGGAGGAGAAGGAGAAGGAC
CTAGAGCTGACCGTGCAGATTGGCAAAGAGCTGCTCACCCAGAACAATGC
ACTCGAGGCACGGGTCGCGGATCTGGAAACCGATCTCAAGGCCTCCAACG
ACGATCGTGCCCAGCTGGTCCACGAGCTGCACAAGAAGAACGAGCTCATC
TCTGTGCTTACCAACGATGCAGACGATGGCACAGATACTGACACTCCCAC
CATGTCGAAGTCTATAACTTTGGATCTACTGCAGCGCAAGGTCAACTCCC
TGCTCGACGAGAACAAGTCTCTGAAATGCGAAACCACCCAACTGGCCCAC
CAGACGGACGAAGTGGAGGAGCACGAGCGCCAGCTGATGGCCGATATCAG
TGCTCAGCTAAACGATGCTAACTCACAGTACGACAACCTCAGTTTGGAGT
TGGAACGGCAGCGGGTAGGAAAACCGGCTGCACCATGAGCAGACTGTGAA
CTGATCGCTCGCCTA
FMO06945.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| milt-RB | 3873 | CG43227-RB | 214..1170 | 9..965 | 4650 | 99.2 | Plus |
| milt-RF | 5469 | CG43227-RF | 1047..1603 | 409..965 | 2650 | 98.6 | Plus |
| milt-RD | 5535 | CG43227-RD | 1113..1669 | 409..965 | 2650 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7050581..7050983 | 9..411 | 2015 | 100 | Plus |
| 2L | 23513712 | 2L | 7051365..7051645 | 410..690 | 1405 | 100 | Plus |
| 2L | 23513712 | 2L | 7051759..7052034 | 690..965 | 1195 | 97.1 | Plus |
Blast to na_te.dros performed 2014-11-28 20:40:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2315..2365 | 310..362 | 116 | 71.7 | Plus |
FMO06945.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:35 Download gff for
FMO06945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RB | 206..1169 | 1..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:28 Download gff for
FMO06945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RB | 348..1311 | 1..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:56 Download gff for
FMO06945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| milt-RB | 206..1169 | 1..964 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:56 Download gff for
FMO06945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7050573..7050983 | 1..411 | 99 | -> | Plus |
| 2L | 7051367..7051645 | 412..690 | 100 | -> | Plus |
| 2L | 7051760..7052033 | 691..964 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:35 Download gff for
FMO06945.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7050573..7050983 | 1..411 | 99 | -> | Plus |
| arm_2L | 7051367..7051645 | 412..690 | 100 | -> | Plus |
| arm_2L | 7051760..7052033 | 691..964 | 97 | | Plus |
