FMO06950.5prime Sequence
593 bp (589 high quality bases) assembled on 2008-10-01
> FMO06950.5prime
CAGTCGACATGATGCTGCTCCGCCTGACTTTGCTGACCGCCTGCTGCCTC
TGCGCCGCCCAGGCGGTGTTGCACGGCAAGGATGTGAAGCGCCGCGAGGC
AGGATTCGACACATACGGTCCGCCGCCACGCCCAGCCCCCCAGTACGGCC
CACCGCCACAGCAGCAGCACGTGCCCCACCGGGAATACGGCGTGCCGCAG
CAGATTCCCTTCAGGGAGTACGGTCCGCCGTCCATCAAATACGGCCCACC
CAAGCTGAACTTCCTGGGAGGCGGCGGAGGAGGCGGTGGTGGCGGTAGCT
CGCTGCACGAGCAGATCAAGACCCACTTCGGAGTGCCCAAGCCCTTCTAT
GGACCCCCGCACATCCAGCACAAGCCGGCACAGCAGTACGGTCCACCACC
ACCGAAGCCTGCACCACAATACGGTCCACCCCCGCAGCCTGCCCCACAGT
ATGGTCCACCACCACCGAAGCCGGCGCCTCAGTATGGTCCACCACCAACA
CAGTACGGTCCACCGCCGCCATTGAAGATCCAGCACCGCCCGGCTCCACA
TTACGGACCACCGAAACTTCAGTACGGTCCACCACCACCACCA
FMO06950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9411-RA | 3684 | CG9411-RA | 311..895 | 8..592 | 2895 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14475272..14475853 | 592..11 | 2880 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:23 has no hits.
FMO06950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:00 Download gff for
FMO06950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 304..895 | 1..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:20 Download gff for
FMO06950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 297..888 | 1..592 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:04 Download gff for
FMO06950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 304..895 | 1..592 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:04 Download gff for
FMO06950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14475272..14475858 | 1..592 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:00 Download gff for
FMO06950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14369305..14369891 | 1..592 | 98 | | Minus |
