FMO06956.5prime Sequence
841 bp (841 high quality bases) assembled on 2008-10-01
> FMO06956.5prime
CAGTCGACATGACGCTGCTCACATCCTCGCTGCTGCTCTTTTCGCTGCTG
ACGTCGCGGCTCGAAGCAATTCCGGTTTTGGAGAAGTCCCCCGCCCATCC
TGCCCACTCTGCACATCCCGCACATCCCGCACATCCCGCACATCCCGCGC
ATCCATCGCCTGGCGTGCGAATTCTTCGCGCACCCGAATCTTTGGTGGCG
CCCCTGGGAGACGAGGTGGTGCTGGAGTGCGAGACCAGTTTGCAGCCAGA
GCGCTTCGAATGGAGCCACCGGTCCAGCAGATCTCCGGGAGCGGGGTTCA
AGTACCTTAAGACAGGCACGGCCAAAGCGAATGTCTCCCAGGAGGCGGCC
ATCTCGCGACTGAGGGTGCTCGTCCGACCAGACACTCTAGGCGAGTACCG
ATGCGTTGGCTGGTTCGGTCCGCTGGTGGTCACGTCTACCATTGCTCGAT
TGGAGCTGGCCAGCACTAGCCTGGTGGACGCTCAGGAATCGGAATCACCC
CTCCAATGGCGGGTGTCTGCTGGAAACTCTGTGCTCTGGTCCTGCGGACA
ACAGGTGCAATCGAATCCATCTGCCAGTTGGTCCTACTATCGAAACGGAG
TGGAAATCAAACCGGAGTTCATCGGAACCAATGGAAATCTTTTTCTAAGC
AATGTATCCTCCGAGTCGTCAGGCAGCTATTCCTGCCAGGCAACCAATCC
TGCCTCTGGCGAGAGAATTCAGCTGCCCGGCTCGCTGCAACTACAGGTTA
CACCAGAGCAGAGGTCGGAGAGTAAATCTCCACACTTGCTCAGGGGACAG
CCGAGCTCCCAGAAAATTACCATACGCGAAGGGAGTTCGCT
FMO06956.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ihog-RA | 3276 | CG9211-RA | 327..1159 | 9..841 | 4135 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6947581..6948413 | 841..9 | 4135 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:16 has no hits.
FMO06956.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:15 Download gff for
FMO06956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ihog-RA | 320..1159 | 1..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:13 Download gff for
FMO06956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| iHog-RA | 290..1129 | 1..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:08 Download gff for
FMO06956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ihog-RA | 320..1159 | 1..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:08 Download gff for
FMO06956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6947581..6948418 | 1..841 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:15 Download gff for
FMO06956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6947581..6948418 | 1..841 | 99 | | Minus |
