FMO06961.5prime Sequence
745 bp (745 high quality bases) assembled on 2008-10-01
> FMO06961.5prime
CAGTCGACATGGAGTTGGTGAAACGCGGGTTCCTGCGTGCGTGCAAGAAC
CACAGCTACCTCAGCTTCGAGCTGATCGATGATATCCTGGCCCCGCTATG
TGCCAACCACAAGACTACAAAGCCCGGCAGCAAGGAGGCGATTAGGGCAC
TGGTGGCGGAGATTAATGACACCATCAGCGACTTGGGCCAGTTGCTGGTC
TTCATCAAGTATCCGGTCAAGGCCGAGGAGTACCTGGTTTACGCCAAGAC
GGACGCTACGCCGGACAGCGTGGCCAACACCGGGCTCACTGCCGAGGAGT
GTCAGTACTTTTCGAAACTGCTGGACAAGATCGCCTCCGAGGAGGACTGC
CACATCGCCTGGAATGACGCCTACAATGATATCGTCCTACAGGCCAGCTC
GAAGCCGTTGAAGAAGAGCCGCATGCAGGAGCTGCTCCAGAAGTGGATCC
AAATGGGCTACTTCATGGAGGTGACCGACAGAATCTACCTAGGTCCACGT
AGCCTCGTCGAGCTCAGTTTCTATTTGAGCTCGAACCACGCCGATAACAT
AAAAAACTGCACGCTGTGCAAGTGCCTGGTGTTGTGGGACATTCGCTGCG
GGTCCTGCAACATCCAGTACCACCGCGGGTGCATCCAAACCTACTTGCAG
AGACGCGATATTTGCCCCTCCTGCGGCAACCTATGGACAACTCCAATAAG
ACGCTCCATTGGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
FMO06961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nse1-RB | 977 | CG11329-RB | 78..782 | 9..713 | 3525 | 100 | Plus |
Nse1-RA | 887 | CG11329-RA | 78..782 | 9..713 | 3525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6676844..6677548 | 713..9 | 3525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:10:45 has no hits.
FMO06961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:55 Download gff for
FMO06961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11329-RA | 70..790 | 1..722 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:34:01 Download gff for
FMO06961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11329-RA | 51..771 | 1..722 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:16 Download gff for
FMO06961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nse1-RA | 70..790 | 1..722 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:16 Download gff for
FMO06961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6676836..6677556 | 1..722 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:55 Download gff for
FMO06961.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6676836..6677556 | 1..722 | 98 | | Minus |