FMO06962.5prime Sequence
692 bp (692 high quality bases) assembled on 2008-10-01
> FMO06962.5prime
CAGTCGACATGGCCGATGAGAAGAAGAAGGTTAAGAAGAAGAAGACCAAG
GAAGAGGGTGGTACTTCCGAAACCGCTTCTGAGGCCGCATCCGAGGCAGC
AACCCCGGCACCAGCTGCCACTCCTGCCCCGGCCGCATCTGCCACTGGTT
CGAAGAGAGCGTCGGGCGGATCCCGTGGCTCCAGGAAGTCGAAGCGCGCT
GGCTCCTCGGTCTTCTCTGTGTTCTCCCAGAAGCAGATCGCCGAGTTCAA
GGAGGCCTTCCAACTCATGGATGCCGACAAGGACGGTATTATTGGCAAGA
ACGATCTGCGCGCTGCCTTCGACTCCGTCGGCAAGATCGCCAACGACAAG
GAGTTGGACGCCATGCTGGGCGAGGCCTCGGGTCCGATCAACTTCACCCA
GTTGCTGACCCTGTTCGCCAACCGCATGGCCACCTCCGGTGCCAACGATG
AAGACGAAGTTGTTATTGCTGCCTTCAAAACATTCGATAACGATGGTCTC
ATCGACGGTGACAAATTCCGCGAAATGCTCATGAACTTCGGTGACAAGTT
CACCATGAAGGAGGTTGATGATGCCTACGATCAGATGGTGATCGACGACA
AGAACCAGATCGATACCGCCGCCCTGATCGAGATGCTCACCGGCAAGGGT
GAAGAGGAGGAGGAGGAGGCCGCCGCAAGCTTTCTAGACCAT
FMO06962.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlc2-RA | 2286 | CG2184-RA | 65..731 | 8..674 | 3335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30172993..30173414 | 674..253 | 2110 | 100 | Minus |
| 3R | 32079331 | 3R | 30173571..30173815 | 255..11 | 1225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:10 has no hits.
FMO06962.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:11 Download gff for
FMO06962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..735 | 1..679 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:59 Download gff for
FMO06962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..735 | 1..679 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:06 Download gff for
FMO06962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..735 | 1..679 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:06 Download gff for
FMO06962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30172989..30173412 | 255..679 | 99 | <- | Minus |
| 3R | 30173572..30173822 | 1..254 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:11 Download gff for
FMO06962.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25998711..25999134 | 255..679 | 99 | <- | Minus |
| arm_3R | 25999294..25999544 | 1..254 | 98 | | Minus |
