FMO06963.5prime Sequence
718 bp (718 high quality bases) assembled on 2008-10-01
> FMO06963.5prime
CAGTCGACATGGCCGAGTACTTGGCATCCATTTTTGGCACGGAAAAGGAC
AAGGTGAACTGTTCGTTCTACTTCAAGATCGGCGCCTGCCGCCACGGCGA
CCGGTGCTCTCGCATCCACAACAAACCCACTTTCTCGCAGACGGTGCTTC
TCCAAAATCTATACGTGAACCCCCAAAACTCCGCCAAATCCGCGGATGGC
TCCCATCTGGTGGCCAACGTCTCCGACGAGGAGATGCAAGAACACTACGA
CAATTTTTTCGAGGACGTGTTCGTAGAGTGCGAGGACAAGTACGGGGAAA
TCGAGGAGATGAACGTGTGCGACAACCTAGGCGACCATCTGGTCGGCAAT
GTGTACATCAAATTCCGTAACGAGGCTGATGCGGAAAAGGCGGCAAACGA
TTTGAACAACCGGTGGTTCGGTGGTCGACCGGTGTACTCGGAACTATCGC
CGGTGACCGACTTCCGCGAGGCTTGCTGTCGGCAGTACGAGATGGGCGAA
TGTACCCGCTCCGGCTTCTGCAACTTCATGCACTTGAAAGCCCATCTCGC
GTGAGCTGCGAAGGTACCTCTACTCCCGCCGCCGTCGTGCCCGCTCCCGT
TCCCGATCCCCTGGACGCCGTCGCGGCTCCCGCATCAGTCCCGATCCCCG
GGTCGAAGAGGAGGCGGCAGAGGCGACGGTGTCTGCGGAAGAAACCTACT
GGACCACGAACGGGAAAC
FMO06963.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| U2af38-RB | 1655 | CG3582-RB | 197..904 | 8..715 | 3360 | 98.6 | Plus |
| U2af38-RA | 1261 | CG3582-RA | 197..904 | 8..715 | 3360 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 293730..294372 | 695..53 | 3075 | 99.2 | Minus |
| 2L | 23513712 | 2L | 294440..294485 | 53..8 | 230 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4569..4606 | 524..487 | 118 | 78.9 | Minus |
FMO06963.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:32 Download gff for
FMO06963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 190..894 | 1..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:56 Download gff for
FMO06963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 188..892 | 1..706 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:36 Download gff for
FMO06963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 190..894 | 1..706 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:36 Download gff for
FMO06963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 293720..294372 | 53..706 | 98 | <- | Minus |
| 2L | 294441..294488 | 1..52 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:32 Download gff for
FMO06963.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 293720..294372 | 53..706 | 98 | <- | Minus |
| arm_2L | 294441..294488 | 1..52 | 92 | | Minus |
