FMO06964.5prime Sequence
815 bp (815 high quality bases) assembled on 2008-10-01
> FMO06964.5prime
CAGTCGACATGATAAGAGAAATGTCCAACCACGATATCAAGCTGGAGGTC
TGCGTGGACTCCATACGATCGGCTTTTGCCGCCGAGGAAGGCGGAGCTTC
ACGCATTGAACTGTGTTCGGCATTGGGCGAAGGTGGCTTGACACCCAGCA
TCGGTACCCTAAAAACTATTAAGGAAACGCTCACAATGCCCATTTACTGC
ATGCTGAGGCCACGGCGGGGCACCGACTTTGTCTACAGCGACGAGGAGAT
GTGCGCCCTGCTCACGGACATGGACTTGCTGCGGGAAAACGGTGCCGATG
GCTTCGTTTTCGGATCCCTGAATCCGGATCGCAGCATCAACGTGGATCAG
TGTCGGCACGTTTTGCTGGCGTCCGGTGGTCTGCCAGTGACCTTTCACCG
CGCCTTCGACCTCACCGACCAGAAGTCCATGGACGAGAATGTCGACATGT
TGCGGGAACTAGGTTTCCGACGTCTGCTGAGCAGCGGATTCCGACCCACG
GCTGCCGATGGCGTAGATTGCCTGGCACAGCTGATAGCCAAACATCAAAG
AGACTTTATAGTTATGCCCGGCGCCGGCATAAAGGTGTCCAACCTGGAGG
AGATCCTCACGGTCAGTCGCTGCCTAGAGTTTCACGCTTCCGCCCTGGAC
ACGGCTGGCGAGGACTACGTGGCGCCCACCACCACGCGAATGGAGTGTGA
CGTGACCATGGGCAAACAGGACGTGGACCCCTACTACGGAACCAACTCCA
TCGTGGTGCGAAAGATGGTTACCATTGCGAAAGCGATGAGCTCCCGCGCA
AGCTTTCTAGACCAT
FMO06964.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6136-RD | 2071 | CG6136-RD | 400..1188 | 9..797 | 3945 | 100 | Plus |
| CG6136-RC | 2177 | CG6136-RC | 400..1188 | 9..797 | 3945 | 100 | Plus |
| CG6136-RB | 1398 | CG6136-RB | 400..1188 | 9..797 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15371025..15371813 | 797..9 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:38:06 has no hits.
FMO06964.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:00 Download gff for
FMO06964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6136-RB | 395..1192 | 1..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:54 Download gff for
FMO06964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6136-RA | 359..1156 | 1..801 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:19 Download gff for
FMO06964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6136-RB | 395..1192 | 1..801 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:19 Download gff for
FMO06964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15371020..15371817 | 1..801 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:00 Download gff for
FMO06964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11196742..11197539 | 1..801 | 99 | | Minus |
