FMO06966.5prime Sequence
305 bp (305 high quality bases) assembled on 2008-10-01
> FMO06966.5prime
CAGTCGACATGAAAGCAGCTTTAGTCCTTCTCTTCCTGACCCTCTGCGTT
GCCATCTACGCCGACCTTGACTGCAATCCCGATGGCAATGGTGAGCCCGA
TTGCGTGGGACGCTCCGGAGAGATTTCCCGTGACTTCTGGGATCCAACCC
ACTACTGGCAGTGCTCTAGCACCGGACAGGCCGAGCTAGTTGCCTGCGAG
CAGAACACTGGATTCGATCCGAAAACTGGAAGCTGCGTCGATTGGAGCGT
TTGGCAGTGGTATCCTCCATGTTCCGAAGCATCCACTGCAAGCTTTCTAG
ACCAT
FMO06966.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Peritrophin-15b-RC | 428 | CG31893-RC | 60..338 | 9..287 | 1395 | 100 | Plus |
| Peritrophin-15b-RA | 337 | CG31893-RA | 33..311 | 9..287 | 1395 | 100 | Plus |
| Peritrophin-15b-RB | 331 | CG31893-RB | 41..305 | 23..287 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8394536..8394807 | 287..16 | 1360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:38:03 has no hits.
FMO06966.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:58 Download gff for
FMO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 19..311 | 1..293 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:49 Download gff for
FMO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 1..282 | 9..291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:17 Download gff for
FMO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Peritrophin-15b-RA | 24..316 | 1..293 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:17 Download gff for
FMO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8394531..8394812 | 10..293 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:58 Download gff for
FMO06966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8394531..8394812 | 10..293 | 97 | | Minus |
