FMO06967.5prime Sequence
230 bp (230 high quality bases) assembled on 2008-10-01
> FMO06967.5prime
CAGTCGACATGGACAAGGTTGTCAAATTCGCCGAACCCGGACGCGCCTTC
GCCAAGGACTCAATCCGCCTGGTGAAGCGCTGCACAAAACCCGACCGCAA
GGAGTTCCAGAAAATCGCCATCGCCACCGCCGTGGGCTTCGCCATCATGG
GCTTCATCGGCTTCTTCGTCAAGCTGATTCACATTCCCATTAACAACATC
ATCGTGGGATCCGCAAGCTTTCTAGACCAT
FMO06967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8860-RA | 420 | CG8860-RA | 110..313 | 9..212 | 1020 | 100 | Plus |
Sec61gamma-RC | 537 | CG14214-RC | 26..228 | 6..208 | 700 | 89.7 | Plus |
Sec61gamma-RB | 792 | CG14214-RB | 158..360 | 6..208 | 700 | 89.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12179590..12179793 | 212..9 | 1020 | 100 | Minus |
X | 23542271 | X | 19643884..19644086 | 6..208 | 700 | 89.7 | Plus |
2R | 25286936 | 2R | 20512745..20512877 | 207..75 | 200 | 76.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:40 has no hits.
FMO06967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:07 Download gff for
FMO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8860-RA | 110..321 | 9..218 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:46 Download gff for
FMO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8860-RA | 46..257 | 9..218 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:55 Download gff for
FMO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8860-RA | 110..321 | 9..218 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:55 Download gff for
FMO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12179582..12179793 | 9..218 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:07 Download gff for
FMO06967.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8067087..8067298 | 9..218 | 98 | | Minus |