FMO06968.5prime Sequence
320 bp (320 high quality bases) assembled on 2008-10-01
> FMO06968.5prime
CAGTCGACATGCAATTGACAAGTATTATCTGCGTCATCTTGTTCCTTGGC
TGTGTACTTATTAATGGACAAAGTCCCGACTGCCGAAAGTTAAGGGACAC
TTGCAATCCTTGCATCCGAAGACTCAATAATCCCATCAATAATGTGGAGT
TCATGAACGAGGGATGCCGTGAGAAAGTCCGTGGCAGATACATCTGGAAG
AATCAGACTCGCTGCGATCTTCAAGTGATCGCTTGCAGTGCTCACAAGAG
GAAACTGGATTGCTTGGTAATAGCCGAGCTTGCTGGGATGCCAAGGCGAA
CTGCAAGCTTTCTAGACCAT
FMO06968.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ef-RA | 420 | CG7599-RA | 34..327 | 9..302 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15657126..15657357 | 240..9 | 1160 | 100 | Minus |
| 3L | 28110227 | 3L | 15656748..15656810 | 302..240 | 315 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord2 | 7650 | accord2 QBERT 7650bp | 5149..5235 | 199..110 | 127 | 64.8 | Minus |
FMO06968.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:33 Download gff for
FMO06968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ef-RA | 34..327 | 9..302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:44 Download gff for
FMO06968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ef-RA | 45..338 | 9..302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:50 Download gff for
FMO06968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ef-RA | 34..327 | 9..302 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:50 Download gff for
FMO06968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15656748..15656809 | 241..302 | 100 | <- | Minus |
| 3L | 15657126..15657357 | 9..240 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:33 Download gff for
FMO06968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15649848..15649909 | 241..302 | 100 | <- | Minus |
| arm_3L | 15650226..15650457 | 9..240 | 100 | | Minus |
