FMO06979.5prime Sequence
368 bp (368 high quality bases) assembled on 2008-10-01
> FMO06979.5prime
CAGTCGACATGCGTTCCCTGATTCTTGTCGCTCTTTTGGCCTTCTTGGCT
GTTGGCTTTGTGGCTGCCCGTCCAGCTGAGGATGAGGAGTCCTCCGCTGC
CGTGGTTGAGAATGCCGATGAGGATTCGACTAGCAATGATGCGGAGAGCA
CCGAAGCCACTGATGCGGAGGAATCTTCTGATGATGAGGAGACGACTGAA
GAGTCTGGTGATGCCGCTGACGAATCCAGCGATGATGCCGATGAGGATGA
GACAACCACTGCAGCTTCGGCCAAGAAGCAGATCCGTCCCTTCTGGCCCA
GGTTCGGAGGTCATGGTCCAGTTGTGATCAGGCGTCACCCTAGTCTTGTC
GCAAGCTTTCTAGACCAT
FMO06979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12310-RA | 544 | CG12310-RA | 42..383 | 9..350 | 1710 | 100 | Plus |
| CG13461-RA | 560 | CG13461-RA | 16..102 | 9..95 | 255 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15050424..15050765 | 350..9 | 1710 | 100 | Minus |
| 3L | 28110227 | 3L | 15052389..15052475 | 95..9 | 255 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:36 has no hits.
FMO06979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:05 Download gff for
FMO06979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 35..383 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:23 Download gff for
FMO06979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 34..382 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:54 Download gff for
FMO06979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 35..383 | 1..350 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:54 Download gff for
FMO06979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15050424..15050772 | 1..350 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:05 Download gff for
FMO06979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15043524..15043872 | 1..350 | 98 | | Minus |
