FMO06980.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-10-01
> FMO06980.5prime
CAGTCGACATGACCGTGGACGAACCGCAGATTGTGGCCATCATTGTCAGC
CACAAGCCACAAGTGGGATACCTGAAGGAGGAGCCCACCTGGATCCGTTG
TCCTTCGTGTGAGAAGTCTGGAACCAGTTTGGTGCAACTGGAGTTGGTCA
CTTGCCTGCAGAGATTTCTGGGATTCACAAAACTTTGTAAAAAATGGTCT
GGCCGCCAGGACATCAATCACTATTGTTCACACTGCGGTTGCTTCATTGG
AAGATTTGTGCCCATCAGCTGCATGGAACGATGCATTTCGAGATCAGCCC
GTAAACAGGCGGCCGTGGATGATATGACCCTGAAGACACGACCCAAGGAT
TGCGCTGAAAGGGCCCAGAAATCCAGGGAGAAAGTTCTGGCCAGCAGGGA
GAAGAAGAGAGCAGAGAAGGCAGCCAAGGATATGGACAAATCTCAGACGC
AAATAGCAGTACACCAAGCAAGCTTTCTAGACCAT
FMO06980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30195-RA | 575 | CG30195-RA | 36..495 | 8..467 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22646696..22646976 | 467..187 | 1405 | 100 | Minus |
2R | 25286936 | 2R | 22647031..22647210 | 187..8 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:29 has no hits.
FMO06980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:03 Download gff for
FMO06980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30195-RA | 27..498 | 1..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:21 Download gff for
FMO06980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30195-RA | 23..494 | 1..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:43 Download gff for
FMO06980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30195-RA | 27..498 | 1..471 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:43 Download gff for
FMO06980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22646692..22646975 | 188..471 | 99 | <- | Minus |
2R | 22647031..22647213 | 1..187 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:17:03 Download gff for
FMO06980.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18534197..18534480 | 188..471 | 99 | <- | Minus |
arm_2R | 18534536..18534718 | 1..187 | 97 | | Minus |