FMO06981.5prime Sequence
713 bp (713 high quality bases) assembled on 2008-10-01
> FMO06981.5prime
CAGTCGACATGAAACTCTTCACCGCCGTCCTTGCCATCTGCCTAGTGGCC
TTTGCGGCAGCCCAATCTGCTGATCCCGCTGCTGCACTGGAGCCTTCCTC
CGAGTACCTGCCTCCCGTCGGCGAGGCGGAGGCCGCCCAGCTTTCGGAGA
ACGGATATAAGTACAGGACCGTGCGCCGGCTGAAGCTGCGCCACCGCCGC
GAGGTGCCTAACCAGGAATACCTTCCTCCCGTGGAAAACGCACCTAGCCA
GGAATATCTGCCGCCAGTAGATGCCGCCGCCATTGGTGACACCAAGGTTG
CCGACGACGGCTACCGGTACAAAACGGTGCGCAAGCTTAAGTTCCGTGCT
CGCCACCGCCGCGACGTCTCCGAAATCGCTGAGCCCAGCGGCGAGTACCT
CCCACCCGTGCAGGTTGAGCTTGCTCCCGAGCTAAAAACCATTCTTGGTG
ATGATGGCTACAAGTACAAGACAGTGCGCCGTCTCAAGTTCCGCCGCCAC
CGCCGCGAGGCTGTCGCCGAAGAGGCTGCTGCCGAGTCCGCACCCAACGG
AGAGTACCTGCCCCCCGCTGAGGCTGCCGCTGCCGCCCCCGCTGCCGCCG
AGGCCGAGCCAAAGTCCGCTGAGGAGGGCACTGAGTTGGCCAAGGACGGC
TACCGCTACAAGACTGTGCGCCGTCTGCGTTACCGCTACCGCCACGCAAG
CTTTCTAGACCAT
FMO06981.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11131-RB | 1379 | CG11131-RB | 525..1211 | 9..695 | 3435 | 100 | Plus |
| CG11131-RA | 949 | CG11131-RA | 95..781 | 9..695 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22899410..22900094 | 11..695 | 3425 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 640..692 | 47..98 | 109 | 69.8 | Plus |
FMO06981.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:16 Download gff for
FMO06981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11131-RA | 88..786 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:18 Download gff for
FMO06981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11131-RA | 82..780 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:09 Download gff for
FMO06981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11131-RA | 88..786 | 1..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:09 Download gff for
FMO06981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22899401..22900099 | 1..701 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:16 Download gff for
FMO06981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22892501..22893199 | 1..701 | 98 | | Plus |
