FMO06984.5prime Sequence
959 bp (955 high quality bases) assembled on 2008-10-01
> FMO06984.5prime
CAGTCGACATGTCGGCCTTCACGGATTCGGCGCTACTCAAGAAGCTGGCC
GAGCTAAACAGCAGCCAGCAGAGCATCCAGACGCTCTCCCTGTGGCTAAT
TCACCACCGAAAACACAGTGCAGCGATTGTAAGGACCTGGCAGCGGGAGC
TGGAGAACGTGCCGGAGCCTAAGAAGCTGACCTTCATGTACCTGGCCAAC
GACGTGATCCAGAACAGCAAGAAGAAGGGCCCGGAGTACGGCAAGGAGTA
CAGCCTTGTGCTGGGCAAGGTGTTCGCCCACATTGGCGAGAAGTGCAACT
CGGACAAGTTGCTGGGCAGCCTGGGAAGGATCCTAAACATCTGGCTGGAG
CGGGGCGTCTACGATCCCAAGACCATTGCCGACTGGAGGTCGCGATTACA
CAAGGAGGCTCCTGGCAGCAGCTCCAGCAGCAATGGCAAGACCAATGGCG
ATAGTGAGAAGCCCGAGAAGGAGAAGGATCACGGCGGCAGCGGCAAGCCC
GAGAAATCCGAGCGCCGCGAGAAGCGCAAGCACGAGGATCGCCACTCTAA
GTCCAAGCGCTCGCGCCATCACGTCCAAGGCAGCAGCGCGAACTCAGCTC
CTCCGACGGAGGAAGTAGTTTTCTGTGGAACCCGAGAACGGCCACACGCC
ACCCTACTTGCCTTTGGGAGAGCCACCGGAGCCCGAGGAGCTCATCAGGG
CCCTGACCAGCATCGAAAACTCCGCATCCAGCGATGCTGTGGTGCGCGAA
CGTATCGCCAAGCTGCCCAGGAAATATCCGAGATTAGCTGCATCACCAAG
CTGGAGGATAAGGATAAGGCCAAGGAACTGGCCATACAGGGGACGAAGCT
GTGGATCTGCTGAACGACTTACAATGGCTCGGTTGGCGGCGAAATGGAGA
ACGCTCCAGTTGGCGACCATTGCTGCAAAATTTTCAGGCGCGAGCCAATG
GACTTCTCC
FMO06984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9018-RA | 1395 | CG9018-RA | 125..1058 | 8..940 | 4345 | 98.2 | Plus |
| CG9018-RB | 1283 | CG9018-RB | 125..1058 | 8..940 | 4345 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2236049..2236730 | 840..159 | 3285 | 99.4 | Minus |
| 3L | 28110227 | 3L | 2236801..2236952 | 159..8 | 760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:51:57 has no hits.
FMO06984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:29 Download gff for
FMO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9018-RB | 118..1062 | 1..945 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:35 Download gff for
FMO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9018-RA | 95..1039 | 1..945 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:20 Download gff for
FMO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9018-RB | 118..1062 | 1..945 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:20 Download gff for
FMO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2236050..2236729 | 160..839 | 99 | <- | Minus |
| 3L | 2236801..2236956 | 1..159 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:29 Download gff for
FMO06984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2236050..2236729 | 160..839 | 99 | <- | Minus |
| arm_3L | 2236801..2236956 | 1..159 | 98 | | Minus |
