FMO06985.5prime Sequence
731 bp (731 high quality bases) assembled on 2008-10-01
> FMO06985.5prime
CAGTCGACATGTTGAAATTGACCTTGAGCTTGGGTCTTCTGCTTCTGGCG
GCCCACAGTGCGTATGCGCAACACCAGGACTACACCACACCGGTGCCCAT
TCTCAAGCAGATCGACAAGCACAACGACGATGGTTCCTACACATATGGAT
ACGAAGCGGCCGATAAGAGCTTCAAGATCGAAACCAAGTACGCGAATGGA
GAGGTCTATGGAAAGTACGGTTATGTGGATGACCAGGGAAAAGTGCGGGA
AATAGAGTATGGAGCCAGTAAGCGTGGCTTTGAGCCCGCTGGCAGTCACA
TCAATGTGCCACCACCTACGCTGACCAACAGCAATCCCTATCCATTGGGA
CCCAACGAATTGGACGATGGCCAGTATCGTGAGGACCCCTCGGTGTACTA
CAAGGACCAGAAGTTCAATCGCCCCCTTTCACCGGCCAGTAAATTCAGTC
TGAACGATTTCGGCCGCGGCCAGCAGCAGGCGTATGCCCCGCCACCTCGG
CAGCCCGCCCCACAAACGCCCTACTACAATCCCACACCCCAATACTACAA
TCCCCCGGCTCCGCAGCCCCGTTACTACCAGCCTCCGGCCCAGAACTACT
ATAATCCCCAGCAGCAACAGCCATACAGGGGGTTGCCGGAGCAACATCAT
CCCTCCCTGCGAAATCTCAACCTCTACACCGGTTCCTATAGCATCGACTA
TACGGGCCGGAAGGCAAGCTTTCTAGACCAT
FMO06985.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr97Eb-RA | 1054 | CG15884-RA | 139..844 | 8..713 | 3530 | 100 | Plus |
| Cpr97Ea-RB | 1502 | CG6131-RB | 436..614 | 102..280 | 235 | 76.1 | Plus |
| Cpr97Ea-RA | 1514 | CG6131-RA | 448..626 | 102..280 | 235 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27089914..27090607 | 713..20 | 3470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:51:29 has no hits.
FMO06985.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:44 Download gff for
FMO06985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr97Eb-RA | 136..844 | 1..713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:29:36 Download gff for
FMO06985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr97Eb-RA | 129..837 | 1..713 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:14 Download gff for
FMO06985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr97Eb-RA | 136..844 | 1..713 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:14 Download gff for
FMO06985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27089914..27090606 | 21..713 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:44 Download gff for
FMO06985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22915636..22916328 | 21..713 | 100 | <- | Minus |
