FMO06989.5prime Sequence
931 bp (931 high quality bases) assembled on 2008-10-01
> FMO06989.5prime
CAGTCGACATGTTCTTGGAAAGAATACTAGTGAGCGTGTTACTGCTCAAC
CTGGTGGCTCTGCTTATGGGAGCCACTGTTACCACCCGGCGCATCCAGCC
GCGGGAGACAAACTCCTGCGAGGGCCGTCAGAGTCCCGGGCCCATCTGCG
AGTCCTGCGAGCTGCTGGCCACCTGCGTGCGTCACTCCAACGGATGGGTG
AACATTCCCGTGGAATCGTGCGACGTGGCTAATGGATACTACTGCAACGC
CCGGCTGGGGAGCTGCACCAACGAGACGGGCCCGTGTCATCCGTTCGGCA
TCGAGGGCAACTTTCAGTGCACCTCGCAAGGCATCTTTCCAGATCCGTAC
GACTGCCAGAAGTACCACATGTGCTACTTCGTGGGGGCCACTCTGGTGGC
TGCTGCCGTTGATTGCGGCAACGACAAGGCCTTCGATGCGACGACTGGCC
AGTGCACTTTGACCCTGACTGACTCCGTCTGCCTGCAGCGACAGTACTAC
TGCCCCAATGCCGGACACGTGGCCGCCTGGCCCACCAATCCCAATATCTT
CTACGTGTGCAAGTCGACGGTTAACCAGAACCTGAACGACACCATCGTCA
TCTACCCCTCGCTGCACAGGTGCAACGATGGCGAGACCTTCGTGGACTAC
GTCTGCCGCAGCGGATCGAATGTCCTGCCGCCCAGCACCGATGATCCTTC
GGTGATCATCGAGGATCCCAACGACGACGACTTTTCGGTGCTGCCCAACA
CCTGTCAGCACGTGGGCTTGATGGCCGATGGAAACGACTGCCGGAAGTAC
TACTACTGCTCGGCTCTAAATGGCACCCTGCGGCACATGGACTGCCCCAA
TGGGACTTACTACCGACCGGGAGCTTTCCTCCTGCGTCCTGGGAAGCTGC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGC
FMO06989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13806-RA | 1175 | CG13806-RA | 104..999 | 4..900 | 4430 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2266603..2267464 | 38..900 | 4250 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:16 has no hits.
FMO06989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:48 Download gff for
FMO06989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13806-RA | 102..999 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:05 Download gff for
FMO06989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13806-RA | 102..999 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:08 Download gff for
FMO06989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13806-RA | 102..999 | 1..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:08 Download gff for
FMO06989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2266495..2266531 | 1..38 | 94 | -> | Plus |
| 3L | 2266604..2267463 | 39..899 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:48 Download gff for
FMO06989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2266495..2266531 | 1..38 | 94 | -> | Plus |
| arm_3L | 2266604..2267463 | 39..899 | 99 | <- | Plus |
