Clone FMO06990 Report

Search the DGRC for FMO06990

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:69
Well:90
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG3224-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06990.5prime Sequence

512 bp (512 high quality bases) assembled on 2008-10-01

> FMO06990.5prime
CAGTCGACATGGGAATGGTATCGAAACGCAAGAAGATGCACTATGGCGAT
ACCCATCTGCAGAGGAGATGGCGTGTGCGGAATCGACGTCGTGATCTCGA
CCAGATCGACGACGATCTGCAGACCCGGAGCGGTGAACTGATCAATCAGA
ATGTGGATCTCGACAAGCCGGGATTCGCGCAGTTCTACTGCGTGCACTGT
GCCAAGTACTTCATCGATGACACCGCCATGCAGGCACATTTCCGCACCAA
GGTGCACAAGAGGCGTCTCAAGGCCCTAGAGATCGAGCCGTACAGCATCG
AGGAGGCGGAACGCGCCGCGGGACGTGGCAGCTTCGTGAAGCCCAAGAAG
CGGGCGATGGAAACGCAGCCATCGAAGGAGGACGTGGTCGCTGGCAAGAG
GATCCGAGTGGAAGTGGTGCCCGAGGATACAGATGCCACCGATTCGCCAT
CGACGTCCAAAACGAAGCGCAAGAAAGTCGAGAAAATGGAGACAGCAAGC
TTTCTAGACCAT

FMO06990.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG3224-RA 851 CG3224-RA 231..716 9..494 2430 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6660687..6661172 494..9 2430 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:53:44 has no hits.

FMO06990.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:42 Download gff for FMO06990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3224-RA 224..721 1..500 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:33:03 Download gff for FMO06990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3224-RA 209..706 1..500 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:04 Download gff for FMO06990.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3224-RA 224..721 1..500 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:04 Download gff for FMO06990.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6660682..6661179 1..500 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:42 Download gff for FMO06990.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6554715..6555212 1..500 98   Minus