FMO07001.5prime Sequence
1147 bp (929 high quality bases) assembled on 2008-10-03
> FMO07001.5prime
CAGTCGACATGGGCTGTGGCTCCTCCATGGATACGCAGACGAATCCTGTC
GTCACGGAGGTCAGCTCGGAAATGCAACCTCGCCAGAATGGCGCCTCTGG
AAATGTGGTCGAGCAATATGTGCGCCTGGACGAGCAGATCAGCAAGCTGG
AGGGCACATGTCCTGGTCCTCGAATGGCCACCGCCGAGGCCTGGGTGGAG
CACATTCAGAGCAAGCACGAGGCGATGCTGGGACTCGATGGCATGGGAGT
GTCTCCTTTGCGCGAGAGGGAATGGGAAACCGAGGAGGCCCTGCCCATTC
CAGCTTACACAATGGGGGGGCGGCAGGGCGACCCAATTGTGGCCAACACG
CCCACCAAGGACCTGGCCCAGCTTGCCTACAACCTGGGCGTAATTGGCGA
TGCCCGCAAGGCTTCCATGCACGAGGATTTCTTCGCCAACCTGAGCGAGT
CCGCCATGTATTTGCTTAGCATTCGTTACTACGGCGAGATGTTGGAACAC
ACTAAGGTGCGTCTAAAGACTCTGGCCGAGAGCTATGCAGAGCTGAACGA
GCTGTACGTAAAGCAAGACGGGATTATAGCGTATATAAGCGGGGGAACGT
ACATGACTCGGCTGGAGGAGAGCATTGATGAGCAGCTTGAGACGGCAAGA
GATACAAGGGATAAGCTGGGCAGCGCACTGGAGCAGTGGCGCATCTGTGG
ATTACTACTTAGAGCAGCCGCGAATTCCTCGACGCAGGCATTAAAACAAT
GGCGACAGCTTGGACGGGATAATAGATCCCAAGCAAAAGCTTCAGTGGGA
CGTTGAACTGTCTAAGTCTGTTACACGCCTCCACGATATCCCCTAAAGGC
GGCTCAGCTGGGCTCTGCCGCACGTGGAACTGAGTACATGAGTCATCGGC
AAGTCCTAGCCGTCAGCACTGCAACACTACCTAATCATGGAAATAGCCAA
AAAGCGCGGTACGAAGCCAACCAGTCGGGTCTTCCACCAGTTACGATCCA
AACTGTCCAAAAACTGGACGGTGGCTCCTCCAAACCTTTAACAGCCGCCT
GCGCCCAAACCTACAAAAGGGGCGGAAGAAACTTGTATGCGCGCTTGGCC
CAAAAGCCCTTCCGGATCTATTCCGAGAGAAGTCCTTCAAACACAGG
FMO07001.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14044-RA | 1318 | CG14044-RA | 111..1192 | 9..1095 | 4725 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4943346..4943743 | 370..767 | 1990 | 100 | Plus |
2L | 23513712 | 2L | 4943011..4943280 | 102..371 | 1350 | 100 | Plus |
2L | 23513712 | 2L | 4943803..4943991 | 774..961 | 505 | 92.7 | Plus |
2L | 23513712 | 2L | 4942852..4942944 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:47:38 has no hits.
FMO07001.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:02 Download gff for
FMO07001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14044-RA | 106..1170 | 1..1071 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:00 Download gff for
FMO07001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14044-RA | 100..1164 | 1..1071 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:19 Download gff for
FMO07001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14044-RA | 106..1170 | 1..1071 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:19 Download gff for
FMO07001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4942847..4942944 | 1..101 | 96 | -> | Plus |
2L | 4943011..4943280 | 102..371 | 100 | -> | Plus |
2L | 4943348..4943748 | 372..773 | 99 | -> | Plus |
2L | 4943803..4943988 | 774..958 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:02 Download gff for
FMO07001.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4942847..4942944 | 1..101 | 96 | -> | Plus |
arm_2L | 4943011..4943280 | 102..371 | 100 | -> | Plus |
arm_2L | 4943348..4943748 | 372..773 | 99 | -> | Plus |
arm_2L | 4943803..4943988 | 774..958 | 92 | -> | Plus |