FMO07003.5prime Sequence
1004 bp (991 high quality bases) assembled on 2008-10-03
> FMO07003.5prime
CAGTCGACATGAAACTCTTCCTGGTCGCTTTTGCCGTGATCGCAGCCGTG
GCTGCCGATGTCAGCCACCTGCCCTCCAACGAGTACCTGCCTCCCGTCCA
GGAGCAGCAGATCATCGCCGGACCCAGCAACGAGTACCTGCCTCCCGTGC
AGGCCGAGTCTGCCCCCGCCCATGAGCTGGCCGATGATGGCTACCGGTAC
AAGACCCACAAGCGCGTGGTGGTCCGCCGCCACCGCCGTGACGTCAACGA
GCTCTTCAACGAGTACCTGCCCCCCTTCGCAGCTCCTTCCAACGAGTACC
TGGCTCCTGCTGAGGGTGCTCCTGAGACCATCTTGGCCGATGATGGATAC
CGTTACAAGACCCACAAGCGCGTGGTAACCCGCCGTCACCGTCGTGATGT
GAGCCACTTGCCCTCCAACGAGTACCTGCCCCCAGTCCAGGCTGCTGCTC
CTTCCAACGAGTATCTGCCCCCAGTGTCCGCCCCCGTCCAGGTTGCTGCC
CCAGCTCCCGCTCCAGTTCAGATCGCCGCCCCTGTCCAGCTGGCCGCCCC
CGCTCCTGTCGTGGTTGAGGCTGAGCCCGCCCATGAGCTGGCCGATGACG
GTTACCGTTACAAGACCCATCGTCGCGTTGTTTACCGCCGCCACCGCCGT
GACGTCAACGAGCTCTCCAACGAGTACCTGCCCCCCTTCGCAGCTCCTTC
CAACGAGTACCTGGCTCCCGCTGAGACTGCTCCTGAGACCGACTTGGCCG
TTGATGGATACCGCTACAAGACCCACAAGCGCGTGGTAACCCGCCGTCAC
CGTCGTGATGTGAACGAGCTCTCCAACGAGTACTTGCCTCCCGTGCAGTC
TGCTCCCTCTGCCGAGTACCTTGCCCCCAGGAAAACACGGTCGAGGCGGC
TCCCGCCCATGTCCTGACTGATGATGGAAACGTCTACCAGACCCACCAGC
GCCGTTGTGTGCCGCCGCCACCCCAGCTTTCTAGACCCATTCGTTTGGCC
GCGC
FMO07003.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7465-RA | 1126 | CG7465-RA | 49..1011 | 9..971 | 4665 | 99.1 | Plus |
CG7465-RA | 1126 | CG7465-RA | 205..486 | 576..854 | 950 | 89.4 | Plus |
CG7465-RA | 1126 | CG7465-RA | 616..894 | 165..446 | 950 | 89.4 | Plus |
CG11350-RC | 1497 | CG11350-RC | 924..1017 | 342..435 | 335 | 90.4 | Plus |
CG7465-RA | 1126 | CG7465-RA | 218..315 | 745..842 | 295 | 86.7 | Plus |
CG7465-RA | 1126 | CG7465-RA | 785..882 | 178..275 | 295 | 86.7 | Plus |
CG7465-RA | 1126 | CG7465-RA | 218..342 | 334..467 | 260 | 80.6 | Plus |
CG7465-RA | 1126 | CG7465-RA | 374..507 | 178..302 | 260 | 80.6 | Plus |
CG11350-RC | 1497 | CG11350-RC | 924..1015 | 753..841 | 260 | 87 | Plus |
CG7465-RA | 1126 | CG7465-RA | 785..882 | 589..686 | 220 | 81.6 | Plus |
CG7465-RA | 1126 | CG7465-RA | 629..726 | 745..842 | 220 | 81.6 | Plus |
CG11350-RC | 1497 | CG11350-RC | 615..720 | 327..441 | 210 | 80 | Plus |
CG7465-RA | 1126 | CG7465-RA | 374..507 | 589..713 | 200 | 77.6 | Plus |
CG7465-RA | 1126 | CG7465-RA | 629..753 | 334..467 | 200 | 77.6 | Plus |
CG7465-RA | 1126 | CG7465-RA | 933..1011 | 155..233 | 200 | 83.5 | Plus |
CG11350-RC | 1497 | CG11350-RC | 630..684 | 753..807 | 200 | 90.9 | Plus |
CG11350-RC | 1497 | CG11350-RC | 924..1012 | 186..271 | 200 | 83.1 | Plus |
CG11350-RC | 1497 | CG11350-RC | 63..134 | 39..109 | 185 | 84.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4480412..4481372 | 11..971 | 4605 | 99.1 | Plus |
3L | 28110227 | 3L | 4480566..4480847 | 576..854 | 925 | 89.4 | Plus |
3L | 28110227 | 3L | 4480977..4481255 | 165..446 | 925 | 89.4 | Plus |
3L | 28110227 | 3L | 4483797..4483890 | 342..435 | 335 | 90.4 | Plus |
3L | 28110227 | 3L | 4480579..4480676 | 745..842 | 295 | 86.7 | Plus |
3L | 28110227 | 3L | 4481146..4481243 | 178..275 | 295 | 86.7 | Plus |
3L | 28110227 | 3L | 4483797..4483857 | 753..813 | 245 | 93.4 | Plus |
3L | 28110227 | 3L | 4480735..4480834 | 178..274 | 225 | 84 | Plus |
3L | 28110227 | 3L | 4480579..4480675 | 334..433 | 225 | 84 | Plus |
3L | 28110227 | 3L | 4480990..4481087 | 745..842 | 220 | 81.6 | Plus |
3L | 28110227 | 3L | 4481146..4481243 | 589..686 | 220 | 81.6 | Plus |
3L | 28110227 | 3L | 4481294..4481372 | 155..233 | 200 | 83.5 | Plus |
3L | 28110227 | 3L | 4483488..4483557 | 327..396 | 200 | 85.7 | Plus |
3L | 28110227 | 3L | 4483503..4483557 | 753..807 | 200 | 90.9 | Plus |
3L | 28110227 | 3L | 4483797..4483852 | 186..241 | 190 | 89.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:30 has no hits.
FMO07003.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:16 Download gff for
FMO07003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7465-RA | 41..1011 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:02 Download gff for
FMO07003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7465-RA | 42..1012 | 1..971 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:29 Download gff for
FMO07003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7465-RA | 41..1011 | 1..971 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:29 Download gff for
FMO07003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4480404..4481372 | 1..971 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:16 Download gff for
FMO07003.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4480404..4481372 | 1..971 | 98 | | Plus |