FMO07007.5prime Sequence
1143 bp (1025 high quality bases) assembled on 2008-10-03
> FMO07007.5prime
CAGTCGACATGGAAGCCATCTGCTCCTCCTTGGAGCCGCTGTTTCCCTGT
CGGGAGGCGGCCATTGAAACGCTGGGCGAGCTGATAGGAGATTCGAGTGA
GACATATCCCTCGGCAATTTACCTATTCGGACACAGTGGAACCGGCAAAA
CAGCTCTGACCAGAGCTTTCCTCAAAGAATGTGGAAAACGGCAAAATGTC
CGCACAGCGCATTTAAATGCCATCGAATGCTACACCACCAAGATAATGCT
GGAGATCCTGTTAGACTCGCTGGCACCCGATCAAGGTGATGCGCTGAAGG
TCGACAACATGCTGGACTTTGTGGAGCAGCTGCGTCGGCAGGCCGCTACA
CGCGTGGAGGATCAGGGATTTCTCATAGCCGTGGATAACGCGGAAAGGCT
GCGCGACATGGATGCCAATGTGTTGCCCGTTCTTCTCCGACTGCAGGAGC
TGACCAACCTGAATCTGTGCGTTATTCTGCTCTCCCAGCTGCCCTTTGAG
AAGTTCTACAACAAGACCGGACTTAGTGAAATCGTCTGCCTGCACTTGGC
GCAGTACAACAAGGCGGAGACACAGCGCATCCTGGGATCTGACTTTCAGC
AGGTGCGAAATCAACTGCTGGAACAGTTCGCCCAGGATAAGAAGCGTCTG
GAGATTTGCCAGGAAGCCGTAACTGAAGACTTCTACAACAACTATCTGAA
TCTCTTTCTGAGCGTCTTTTACAAAGCCTGTCGCGATGTTCCAGAGCTCC
AGCTGACCGCCAGGAAGTGTCTGTCCACATACTTGGAGCCCGTACTCGAC
GGCACTGTGGATGCCACGGACATCTCCCGGCTTTGGCGGCATATAGCTGG
ACCACTGCGTTCCGCCTTAACCCAGATTTATATGCGAATTGAAAAACCCG
CGGAAGAGTTGAAGATTTCACCGCCATAATAGATCACAGCGTCGCAAGCT
GGCGCAGTCGCTGGGAGCTGCCCTACTATGCCAAATTCCTGTGATCGCCT
GCCTGCTAGCCAGCCAATGCCCGCCAGCCAGAACAGCGATTGTCGTCAAG
CCACCATGAAACAGCGAAAGGCGATGCAGACGGTCCACGCCCAAGCCAGA
CCAGGAAAAAAATGTCCACCACCTTTGGACATCTTACATCGAT
FMO07007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Orc5-RA | 1687 | CG7833-RA | 201..1329 | 9..1130 | 5025 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13830037..13831132 | 9..1098 | 4715 | 97 | Plus |
Blast to na_te.dros performed 2014-11-28 22:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAHRE | 10463 | TAHRE OSV 10463bp | 492..548 | 1011..1066 | 120 | 70.2 | Plus |
FMO07007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:43 Download gff for
FMO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 196..1326 | 1..1128 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:05 Download gff for
FMO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 342..1472 | 1..1128 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:02 Download gff for
FMO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Orc5-RA | 196..1326 | 1..1128 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:02 Download gff for
FMO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13830032..13831134 | 1..1099 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:43 Download gff for
FMO07007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13830032..13831134 | 1..1099 | 97 | -> | Plus |
