Clone FMO07009 Report

Search the DGRC for FMO07009

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:9
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRpL26-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07009.5prime Sequence

473 bp (473 high quality bases) assembled on 2008-10-03

> FMO07009.5prime
CAGTCGACATGAAACAGAACCCGTTCGTGTCGTCGTCGCGCAGGAAGAAC
CGCAAGCGTCACTTCCAGGCTCCCTCCCACATTCGCAGGCGCCTCATGTC
CGCTCCCCTCTCCAAGGAGCTGCGCCAGAAGTACAATGTGCGTTCCATGC
CCATCCGCCGCGACGATGAGGTCCAGGTGATCCGCGGCCACTTCAAGGGC
AACCAGGTGGGCAAGGTGGTCCAGGCCTACCGCAAAAAGTTCGTCGTCTA
CGTCGAGAAGATCCAGCGCGAGAACGCCAACGGCACCAACGTCTACGTGG
GCATCCATCCCAGCAAGGTGCTGATCGTCAAGCTGAAGCTCGACAAGGAC
CGCAAGGCCATCCTGGAGCGTCGCGGCAAGGGTCGTCTGGCCGCTCTCGG
CAAGGATAAGGGCAAGTACACCGAGGAGACCGCCGCCCAGCCCATGGAGA
CCGCGGCAAGCTTTCTAGACCAT

FMO07009.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
RpL26-RB 652 CG6846-RB 55..501 9..455 2235 100 Plus
RpL26-RA 648 CG6846-RA 51..497 9..455 2235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18899320..18899766 9..455 2235 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:33:09 has no hits.

FMO07009.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:25 Download gff for FMO07009.5prime
Subject Subject Range Query Range Percent Splice Strand
RpL26-RA 43..500 1..459 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:07 Download gff for FMO07009.5prime
Subject Subject Range Query Range Percent Splice Strand
RpL26-RA 73..530 1..459 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:12 Download gff for FMO07009.5prime
Subject Subject Range Query Range Percent Splice Strand
RpL26-RA 43..500 1..459 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:12 Download gff for FMO07009.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18899312..18899769 1..459 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:25 Download gff for FMO07009.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18892412..18892869 1..459 98   Plus