FMO07010.5prime Sequence
350 bp (350 high quality bases) assembled on 2008-10-03
> FMO07010.5prime
CAGTCGACATGGCCGCCCACAGCTCGGCGGGACTTCTGGACTACGTCTTC
CCCACCATTGTGTCGGAGTATTACAACCAGGCGCCGACCAAGGAGGGATA
CCGCTTCGCGTCGGAGGAGCCAAATGGCAGCAAGCGCGAGGAGATGGGCG
TGATCATGAACCCCGGCACTCCCGACGAGCAACTGGTGGTCATGGGTATG
TACTCCTCGTACGATGAAAAGACTGACACCGAGACTGTGACGATGTACAC
CGCCGACAAGGATGGTTACAAGGCCCGTTACCAGATCAAGAACCGGAAAC
TGAGCCCCGGAGCCCTGAAGTCCGCTGCTGGAGCAAGCTTTCTAGACCAT
FMO07010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15515-RB | 472 | CG15515-RB | 80..403 | 9..332 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29906157..29906379 | 110..332 | 1115 | 100 | Plus |
| 3R | 32079331 | 3R | 29905999..29906101 | 9..111 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HMS-Beagle2 | 7220 | HMS-Beagle2 Beagle2 7220bp | 5550..5622 | 198..270 | 113 | 65.3 | Plus |
FMO07010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:24 Download gff for
FMO07010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15515-RB | 80..407 | 9..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:46 Download gff for
FMO07010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15515-RA | 534..861 | 9..337 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:26 Download gff for
FMO07010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15515-RB | 80..407 | 9..337 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:26 Download gff for
FMO07010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29905999..29906099 | 9..109 | 100 | -> | Plus |
| 3R | 29906157..29906383 | 110..337 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:24 Download gff for
FMO07010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25731721..25731821 | 9..109 | 100 | -> | Plus |
| arm_3R | 25731879..25732105 | 110..337 | 99 | | Plus |
