FMO07011.5prime Sequence
1123 bp (999 high quality bases) assembled on 2008-10-03
> FMO07011.5prime
CAGTCGACATGACGCGATCTTCGCCAGCTTGGTGTGCTGGCCAGGCCTGG
CTCGTCTGGCTTTTGGCATCCATCTGGATACGCACGTGTCTCGCGCAATT
TGCAGTCTCCTCGTCCTCCGCCGGCGGAGCTGTTGCCTCCGCCGGTGGCG
TCACTGTGGTGGCCCAGCTGCCCGGTTTCGGAGTTATCAATGGACTGATC
AATGCCATGCACAACAACAACCGCTTCAACCAGCAGCCGCAGTTCGAGAG
ACTGCAGCAAGGAAGGCCGGGGATGGGTCCGAATCGAGGAGGAATGCACA
GACCAGGATTTGCACCACCCAACCGTCAGCAACCGACGCCTCCTGGCTGG
CCACCCGGCTGGCAGTGGGGAGCCGGTGGAAATCAGAATCAACCCGGATT
TGACTGGGTTCAAACAGGATTTGCACCAGGCTGGAATGGAGGTGGAGGGC
AAGGACCAGGATGGAATGGTCCAGGATGGAACGGAGGCGGTGGAAGAGGA
CCTCCACCAAGACCAGGTTTTAACGGCGGCGGACCACCGCCGCCAAGACC
AGGATGGAACGGCGGCGGGCCACCACCACCGATGCCAGGCTGGAATGGAG
GAGGGCCACCGCCACCAAGGCCAGGATGGAATGGCGGAGGACCTCCGCCA
CCAAGGCCAGGCTGGAATGGAGGGATGGAACAGGAATGGGATAACTATCC
ACGCCTCCCCGATCAGCCGGATCCCAATGATCCAAACACGAATTGGAATC
CAGATAATGAGTCTAGCACCACTCCACAAACGCCAATACCAGGACCCATC
TTTCCAACGACAACACCTAAGCCAGAGCCCACCTTTCCCACGATCCAGCC
ACGTCCAACGCTCAGGCAACGAAGATACGCTCATATACGAACCAATCGAC
CGCCGTTGGTGCCGCCCATAATCCGGATCCACCCACGCCCACTTTCCCAC
TTGGATCGTGCCGGAGCCATGCAAACCATTGGACGAACTCCTCCGAAAAT
CGTGCTATTTAATTCCCAGCTCTTAGCAACTATATCCATTTTGCCAACCT
GGGAGTTCCTCAATTCCATTGAATGTGAGAACGAAAAAGCAGCTTCTAGA
ACATTCCTGGCGCGCGGCCAGGT
FMO07011.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7016-RA | 1286 | CG7016-RA | 49..1147 | 7..1098 | 4910 | 97.3 | Plus |
CG7016-RA | 1286 | CG7016-RA | 542..676 | 536..670 | 330 | 83 | Plus |
CG7016-RA | 1286 | CG7016-RA | 578..712 | 500..634 | 330 | 83 | Plus |
CG7016-RA | 1286 | CG7016-RA | 542..643 | 572..673 | 210 | 80.4 | Plus |
CG7016-RA | 1286 | CG7016-RA | 614..715 | 500..601 | 210 | 80.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24862979..24864018 | 7..1039 | 4630 | 97.9 | Plus |
3R | 32079331 | 3R | 24863472..24863606 | 536..670 | 330 | 83 | Plus |
3R | 32079331 | 3R | 24863508..24863642 | 500..634 | 330 | 83 | Plus |
3R | 32079331 | 3R | 24863472..24863573 | 572..673 | 210 | 80.4 | Plus |
3R | 32079331 | 3R | 24863544..24863645 | 500..601 | 210 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:34 has no hits.
FMO07011.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:37 Download gff for
FMO07011.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 42..1095 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:35:57 Download gff for
FMO07011.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 41..1094 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:09 Download gff for
FMO07011.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7016-RA | 42..1095 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:09 Download gff for
FMO07011.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24862972..24864010 | 1..1031 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:37 Download gff for
FMO07011.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20688694..20689732 | 1..1031 | 98 | -> | Plus |