FMO07014.5prime Sequence
802 bp (-49 high quality bases) assembled on 2008-10-03
> FMO07014.5prime
AATAAAAAAGAAGTTATCAGTCGACATGGACACGCCACGCCGCAAGCAAA
GAAATTTGCACCTGGAGAATGTCCAGAACAGCAGCACTCCCATCAACGTG
CCGCCATCGCCGATGATGAAGACCCTGGGCCACGGCACTGGGATCCGGGT
CTACCGCTTGGACCGCTCGCCTCGTCTCGGCGAAATCCGCTCGCCCTGGG
CCGTCAAGCGGATCACGCAGAACATGCGGGTCAAGAAGGATACACTCTTC
AACGAGCGAATTGTTCACGAGGCCGATATCCTGCGCAAACTGAAGCATCC
AAACATCGTGGGATTCCGTGGCGTTATCACCAATGACGAGGGCATCAACA
CACTGGCACTTGAAATGTGCACCACTTCACTGGGCTCCATACTCGAGGAG
CGACACGACGAGGATCTGGGCCCGTTGTCGGCCAAACATACCTATAAGAT
GATCATGGACGTGGCCCAGGCACTAGACTTTCTTCACAACGAAGCTCACC
TCATGCACGGCGACCTTAAGTCCTTTAATGTCCTGTTCAAAGGCGAGTTT
GAGATTTGTAAGCTGTGCGATTTTGGAGTCTCTCTTCCGCTGGACGAGCA
GGGCGAGGTTAATTTCCTAAAGAATCCCGGACTGCGCTATGTGGGAACTA
ACCTCTGGTGCGCACCGGAGGTCATAGACGAAGTGGATGTTATTTGACAG
CAAGGCAACATATTCAGCTTTGGCCTGGTTATCTACGAAACCCTTGCTTT
GGGTGCCTCCACATTACCTTGGGAGCTTGATGCAGCCCTGGGGAGAGGAT
AT
FMO07014.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8173-RA | 1643 | CG8173-RA | 213..985 | 26..802 | 3680 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17708288..17708648 | 645..285 | 1775 | 99.4 | Minus |
| X | 23542271 | X | 17709182..17709441 | 285..26 | 1285 | 99.6 | Minus |
| X | 23542271 | X | 17708068..17708213 | 792..644 | 485 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:24:51 has no hits.
FMO07014.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:55 Download gff for
FMO07014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 211..985 | 22..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:23 Download gff for
FMO07014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 216..990 | 22..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:25 Download gff for
FMO07014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8173-RA | 211..985 | 22..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:25 Download gff for
FMO07014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17708059..17708212 | 645..802 | 95 | <- | Minus |
| X | 17708289..17708647 | 286..644 | 99 | <- | Minus |
| X | 17709182..17709443 | 22..285 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:55 Download gff for
FMO07014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17602092..17602245 | 645..802 | 95 | <- | Minus |
| arm_X | 17602322..17602680 | 286..644 | 99 | <- | Minus |
| arm_X | 17603215..17603476 | 22..285 | 98 | | Minus |
