FMO07019.5prime Sequence
482 bp (482 high quality bases) assembled on 2008-10-03
> FMO07019.5prime
CAGTCGACATGTCGGCTGCTACGGAACAACAGAACAACGGCGATGTGGCC
GTGGAGAAGGTGGCGGCAGATGATGTGTCTGCTGTCAAGGACGATCTCAA
GGCGAAGGCGGCCGCCGAGGATAAGGCCGCTGCTGCCGATGCCGCCGGCG
ACGCGGCCGACAACGGTACGTCAAAGGACGGCGAGGATGCCGCCGATGCC
GCCGCCGCTGCCCCCGCAAAGGAATCCGTGAAAGGCACCAAGAGGCCAGC
AGAAGCCAAATCCGCAGAATCAAAGAAGGCCAAGAAGGCCGCGGCCGCCG
ATGGAGATTCCGATGAGGAAGAGGCTCTGGAGGAAATCATCGAGGGCGAC
AGTGAAATCGAGAGCGACGAGTACGACATCCCCTACGATGGTGAGGAGGA
TGACATTGAATGTGATGATGATGATGATGATAATGATGACGGTTCCGGCT
CGGACGATCAGGCGGCAAGCTTTCTAGACCAT
FMO07019.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Bacc-RD | 2524 | CG9894-RD | 440..895 | 9..464 | 2280 | 100 | Plus |
Bacc-RC | 2221 | CG9894-RC | 82..537 | 9..464 | 2280 | 100 | Plus |
Bacc-RA | 1010 | CG9894-RA | 183..638 | 9..464 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2753415..2753661 | 9..255 | 1235 | 100 | Plus |
2L | 23513712 | 2L | 2756008..2756174 | 255..421 | 820 | 99.4 | Plus |
2L | 23513712 | 2L | 2756244..2756291 | 417..464 | 240 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:11:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1c | 5443 | Rt1c RT1C 5443bp | 1161..1230 | 210..275 | 106 | 65.7 | Plus |
FMO07019.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:55 Download gff for
FMO07019.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bacc-RA | 183..641 | 9..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:27 Download gff for
FMO07019.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9894-RA | 182..640 | 9..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:35 Download gff for
FMO07019.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Bacc-RA | 183..641 | 9..468 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:35 Download gff for
FMO07019.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2753415..2753660 | 9..254 | 100 | -> | Plus |
2L | 2756008..2756170 | 255..417 | 100 | -> | Plus |
2L | 2756245..2756294 | 418..468 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:55 Download gff for
FMO07019.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2753415..2753660 | 9..254 | 100 | -> | Plus |
arm_2L | 2756008..2756170 | 255..417 | 100 | -> | Plus |
arm_2L | 2756245..2756294 | 418..468 | 96 | | Plus |