FMO07020.5prime Sequence
464 bp (464 high quality bases) assembled on 2008-10-03
> FMO07020.5prime
CAGTCGACATGACGGCGACTGCGAGGCAGTCGGCAACATCGAGAAAGCAA
CCTGCGATCGCAATGCTCAATGGAAACGCTTTTACGGTTAAGCGGCTCTT
AGCGCTGCTGATCATCTTCACAGTGGTGGACGCGAGTCGATCCCTGGAGC
TGGGCGACAAGTGCCAGCATGACATGGACTGCACGGATTTCATCAAGGGC
AGCAGCTGCTCCGCCCTCGGATACTGCGAGTGCGCCCCCTACTTCGTCCA
GTTGGATTCCAAGCGCTGTTTGTCATCCCAGCTCCTTGGCGGCGACTGCC
AGCTGAGCGAGCAGTGCTCCATGAAGGTGGCCAATAGCAGTTGTCTGGAG
GGTGCATGCCGCTGCGTCGAGGGATTCCTGCAGTTCCGCAAGCACACCTG
TCTGGGACGTAAGTATCAGCCGACCGCCGGCCAGCTATTGTGGCCCGCAA
GCTTTCTAGACCAT
FMO07020.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE1-RB | 919 | CG32356-RB | 355..792 | 9..446 | 2190 | 100 | Plus |
| ImpE1-RC | 6099 | CG32356-RC | 411..810 | 9..408 | 2000 | 100 | Plus |
| ImpE1-RA | 6043 | CG32356-RA | 355..754 | 9..408 | 2000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8379144..8379316 | 104..276 | 865 | 100 | Plus |
| 3L | 28110227 | 3L | 8379854..8380023 | 277..446 | 850 | 100 | Plus |
| 3L | 28110227 | 3L | 8374976..8375071 | 9..104 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:23 has no hits.
FMO07020.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:08 Download gff for
FMO07020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 347..797 | 1..454 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:22 Download gff for
FMO07020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 343..793 | 1..454 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:35 Download gff for
FMO07020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 347..797 | 1..454 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:35 Download gff for
FMO07020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8379854..8380028 | 277..454 | 97 | | Plus |
| 3L | 8374968..8375071 | 1..104 | 96 | -> | Plus |
| 3L | 8379145..8379316 | 105..276 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:08 Download gff for
FMO07020.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8368068..8368171 | 1..104 | 96 | -> | Plus |
| arm_3L | 8372245..8372416 | 105..276 | 100 | -> | Plus |
| arm_3L | 8372954..8373128 | 277..454 | 97 | | Plus |
