FMO07022.5prime Sequence
478 bp (-60 high quality bases) assembled on 2008-10-03
> FMO07022.5prime
TTCAAGACGGTTGAATACATCCTGAGCACATTCCGAAAATTACTCCGCTT
TGGTAAGTGCGTTGATGTATTCTACGGCGCTCTGAAAACCATTCACCATC
CGGATCTTAACATCCGTGTGACGCTCACCTTAAGCAAGCTGTCACAATCG
CTGTTCCTCTTCGCCGCTCTCTTCCTCTGGCTGGCCAGGACGGGACTGAC
GGCGGTGAACGCCAAGCGCTGGTCCAACATCGCCAATAAGTACTGGCTCT
TCTCGATCATAATGAACTTGTGCCGGGACTTCTACGAGATCCTGAGAGTA
CTGGACCTGCATCGATCCGGTAGCAAGAGCGGCATTTCGCGCTGCCTCAT
CCCCGCTAGCATCAACTCTCCGGAGGACTTTAAGCGCCTTGCCCTGCAGT
CCTACTTGCTGATGCAGGGACACAAATACATAGTTGTTGGACACGGTGAA
GAAGCGTGCGACTTCTTCATCCGCTGAC
FMO07022.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex11-RA | 956 | CG8315-RA | 236..714 | 1..478 | 2205 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15991618..15992047 | 470..41 | 1935 | 97.7 | Minus |
| 2R | 25286936 | 2R | 15992101..15992140 | 40..1 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:28 has no hits.
FMO07022.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:14 Download gff for
FMO07022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex11-RA | 236..714 | 1..478 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:36:18 Download gff for
FMO07022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8315-RA | 212..690 | 1..478 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:26 Download gff for
FMO07022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex11-RA | 236..714 | 1..478 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:26 Download gff for
FMO07022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15991609..15992047 | 41..478 | 97 | <- | Minus |
| 2R | 15992101..15992140 | 1..40 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:14 Download gff for
FMO07022.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11879114..11879552 | 41..478 | 97 | <- | Minus |
| arm_2R | 11879606..11879645 | 1..40 | 100 | | Minus |
