Clone FMO07029 Report

Search the DGRC for FMO07029

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCoVa-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07029.5prime Sequence

473 bp (473 high quality bases) assembled on 2008-10-03

> FMO07029.5prime
CAGTCGACATGTTGAGCATCACGGCCCGTAACCTGGCAAGCGCCCTCCGC
AGCAGCCTCGTCGGCACATCGTCGCGCGTGGCCGCCGTGCGCTGTCTGCA
CGGAACCGAGGAATCGGCGGAGGAGTTCGACAAGCGCTACGAGAAGTACT
TCAGCCGTGAGGGCATCGATGGCTGGGAGATCCGCAAGGGCATGAACGAT
CTGCTGGGCATGGATCTGGTGCCCAGCCCCAAGATCATCGAGGCCGGTCT
GCGTGCCAGCCGTCGCGTCAACGACATTGCACTGGCCATCAGGTGGCTGG
AGGGATGCAAGGACAAGTGCGGCGACCAAAAGGCCACCCTCTATCCCTAC
TTGCTGGAGAAGATCACCCCCACACTGCAGGAGCTGGGCATCCCAACCAT
CGAGGAACTGGGCTACGACAAGCCCGAATTGGCCCTGAAGTCCGTGTACG
ATGCCGCAAGCTTTCTAGACCAT

FMO07029.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
CoVa-RC 635 CG14724-RC 46..494 7..455 2245 100 Plus
CoVa-RA 730 CG14724-RA 141..589 7..455 2245 100 Plus
CoVa-RB 701 CG14724-RB 113..560 8..455 2240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11819711..11820158 8..455 2240 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:10:15 has no hits.

FMO07029.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:21 Download gff for FMO07029.5prime
Subject Subject Range Query Range Percent Splice Strand
CoVa-RA 134..594 1..461 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:38 Download gff for FMO07029.5prime
Subject Subject Range Query Range Percent Splice Strand
CoVa-RA 134..594 1..461 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:45 Download gff for FMO07029.5prime
Subject Subject Range Query Range Percent Splice Strand
CoVa-RA 134..594 1..461 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:45 Download gff for FMO07029.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11819705..11820163 1..461 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:21 Download gff for FMO07029.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7645427..7645885 1..461 98   Plus