FMO07029.5prime Sequence
473 bp (473 high quality bases) assembled on 2008-10-03
> FMO07029.5prime
CAGTCGACATGTTGAGCATCACGGCCCGTAACCTGGCAAGCGCCCTCCGC
AGCAGCCTCGTCGGCACATCGTCGCGCGTGGCCGCCGTGCGCTGTCTGCA
CGGAACCGAGGAATCGGCGGAGGAGTTCGACAAGCGCTACGAGAAGTACT
TCAGCCGTGAGGGCATCGATGGCTGGGAGATCCGCAAGGGCATGAACGAT
CTGCTGGGCATGGATCTGGTGCCCAGCCCCAAGATCATCGAGGCCGGTCT
GCGTGCCAGCCGTCGCGTCAACGACATTGCACTGGCCATCAGGTGGCTGG
AGGGATGCAAGGACAAGTGCGGCGACCAAAAGGCCACCCTCTATCCCTAC
TTGCTGGAGAAGATCACCCCCACACTGCAGGAGCTGGGCATCCCAACCAT
CGAGGAACTGGGCTACGACAAGCCCGAATTGGCCCTGAAGTCCGTGTACG
ATGCCGCAAGCTTTCTAGACCAT
FMO07029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CoVa-RC | 635 | CG14724-RC | 46..494 | 7..455 | 2245 | 100 | Plus |
CoVa-RA | 730 | CG14724-RA | 141..589 | 7..455 | 2245 | 100 | Plus |
CoVa-RB | 701 | CG14724-RB | 113..560 | 8..455 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11819711..11820158 | 8..455 | 2240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:15 has no hits.
FMO07029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:21 Download gff for
FMO07029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CoVa-RA | 134..594 | 1..461 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:38 Download gff for
FMO07029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CoVa-RA | 134..594 | 1..461 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:45 Download gff for
FMO07029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CoVa-RA | 134..594 | 1..461 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:45 Download gff for
FMO07029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11819705..11820163 | 1..461 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:21 Download gff for
FMO07029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7645427..7645885 | 1..461 | 98 | | Plus |