FMO07030.5prime Sequence
554 bp (554 high quality bases) assembled on 2008-10-03
> FMO07030.5prime
CAGTCGACATGAATCAAGCCGATGTAACAAAGCTCATGTCACAGCTGCGT
ATAGCGGTCAGGCCCAACAAGCGCCATCTGAAGAATGTCGATGGCCCGGA
AGGTCGGCTGCTGAAGCTGCGTAAGACCGTCACTGCGTTGGTGAAGCACG
AGCGTATTGAACTGTTCTACAACCGTGCCGATGAAGCTCGTGGCTACGCC
GAACTGCTCATTTCCAATGCCATACGCCATGGGGACCGACACCAAGCCAC
CATGGAACTGGCGGACTATTGGCTGCTGGAAAAGCAACTGGTTCATAAGC
TCTTCAAGGTGCTGGTACCGCGCTATGAGACTTACAATGTGTCCTACACT
CGCATGTACAAAGCCCCTCGGGAGTATCCTGGCATTTACTACAGGCGGTC
TGTGCTGGAGCTTCGGGGCAATCCCTACCCTTCGCTGGCGGCGGATCATT
CTCAGAACCGGAATCTGCTGCACAATGTGCTTCTGGACGAGGCGAGAAAG
GAGTTTAGGCGTCAAAAACTGTCGGAGTTAGTTCACGCAAGCTTTCTAGA
CCAT
FMO07030.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL17-RB | 1092 | CG13880-RB | 74..601 | 9..536 | 2640 | 100 | Plus |
| mRpL17-RA | 756 | CG13880-RA | 74..601 | 9..536 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 265111..265441 | 206..536 | 1655 | 100 | Plus |
| 3L | 28110227 | 3L | 264852..265049 | 9..206 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:22 has no hits.
FMO07030.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:22 Download gff for
FMO07030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 66..609 | 1..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:39 Download gff for
FMO07030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 63..606 | 1..543 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:29 Download gff for
FMO07030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 66..609 | 1..543 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:29 Download gff for
FMO07030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 264844..265049 | 1..206 | 98 | -> | Plus |
| 3L | 265112..265449 | 207..543 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:22 Download gff for
FMO07030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 264844..265049 | 1..206 | 98 | -> | Plus |
| arm_3L | 265112..265449 | 207..543 | 99 | | Plus |
