FMO07031.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-10-03
> FMO07031.5prime
CCTATACGAAGTTATCAGTCGACATGTCTGTGCTGCGTGCACTGATGTTT
CTGGCCTTTGGTGCCACCGTGGCGCTGGCCCAACGTCGCCTGGCTCTGCC
CGATCCGAGGAGTTGCGCCAACCGGGTGCGCCATGCCAGCTATCGGGATG
CCAGGGGCGTGTCCCACTCGTACTTCTTCAGCTGGGAGCATGCTCCTACC
CGCAGCCTGGAGGTGGATTGGCTGGATGCGAGGAACATCTGCCGCAGGCA
CTGCATGGATGCCGTTTCCCTGGAGACGCCACAGGAGAATGACTTTGTGA
AGCAGAGGATTGCCAGGGGCAATGTGCGATACATTTGGACCTCGGGCAGG
AAGTGCAACTTCGCTGGCTGCGACAGGCCCGATCTGCAGCCTCCCAATGA
GAACGGTTGGTTCTGGTCGGGATCGGGGGCAAAGATTGGACCCACTTCGC
AGAGGAACACCGGCGATTGGTCTTCAACGGGCGGATACCAACAGCCGCAG
CCCGATAACCGGGAGGCCGCGCAGGGCAACGACGAGAGCTGCCTGTCCAT
CCTGAACAACTTCTACAACGATGGCATCAAGTGGCACGACGTGGCCTGCC
ATCACATCAAGCCATTTGTGTGCGAGGACTCCGATGAGCTGTTGAACTTC
GTCCGCTCCCGGAACCCCAATGTCCGCTTGGCAAGCTTTCTAGACCAT
FMO07031.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6055-RB | 1034 | CG6055-RB | 87..743 | 24..680 | 3285 | 100 | Plus |
| CG6055-RA | 1087 | CG6055-RA | 140..796 | 24..680 | 3285 | 100 | Plus |
| CG4115-RA | 1115 | CG4115-RA | 307..376 | 208..277 | 185 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7471546..7472202 | 24..680 | 3285 | 100 | Plus |
| 3R | 32079331 | 3R | 12360375..12360444 | 208..277 | 185 | 84.3 | Plus |
| 2L | 23513712 | 2L | 4797160..4797219 | 599..540 | 180 | 86.7 | Minus |
| 3R | 32079331 | 3R | 12362803..12362913 | 561..671 | 180 | 77.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:58:23 has no hits.
FMO07031.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:40 Download gff for
FMO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6055-RA | 140..801 | 24..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:40 Download gff for
FMO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6055-RA | 137..798 | 24..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:34 Download gff for
FMO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6055-RA | 140..801 | 24..688 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:34 Download gff for
FMO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7471546..7472207 | 24..688 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:40 Download gff for
FMO07031.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7471546..7472207 | 24..688 | 99 | | Plus |
