FMO07032.5prime Sequence
1068 bp (981 high quality bases) assembled on 2008-10-03
> FMO07032.5prime
CAGTCGACATGGCAAGCATAGTACTTATAGCTTGCTTGGCTATATTGGGA
TTAATTATTACAATCGCTCTTTTTCTGGCTGGAGGATACTTGTGGTGGAG
GCATAAAAGATCACAGTTACAGTTTATTGAACCAAATGAAGATGAGGAAT
CTAGTAGTTATAGTCTTCGGGCTGCTCAGGATATTGTTGACTCTGGTAAT
CCACCTACAAAACCGCAAGTGCCGGTGGCACATGCTATCACGACTCCTCT
CCAAAATAATATTAACAGGAAATTAAATGGATTTTTAAGTCTTAGAACTC
CTTTGATTGGCGGGTCGGGGGCCTCTCAAACAAAACCGCAAATCATTTCT
TCAGTTGGAAATCCTGGAGATGGGACTACGAAAGATTCTGCAAATAAAAG
TATCTCAATGACAGACATGTATTTGGATAGCACCGATCCAAGTGAAAATG
TTGGGCAAATACATTTCTCCTTGGAGTATGATTTCCAAAACACAACATTA
ATTTTGAAAGTTCTTCAAGGAAAAGAGCTTCCAGCAAAAGATTTGAGTGG
TACTTCCGATCCATATGTTCGTGTAACGCTGTTACCAGATAAAAAGCATA
GATTGGAAACCAAAATAAAACGGCGAACCCTTAATCCACGATGGAATGAA
ACATTTTATTTTGAAGGTTTTCCAATTCAAAAACTTCAATCACGTGTTTT
ACACTTACATGTTTTTGATTACGATCGGTTTTCAAGAGATGACTCCATAG
GGGAAGTATTTCTTCCTTTATGTCAGGTTGACTTTGCTGGAATAACAATC
TTTTTGGAAGGCTTTAAAGCCCCCTGCAAAGGATAAATGCGGAGAACTTC
TCTCCTCCCTTTGCTATCACCCGTCGAACTCAATTTTGACTTTAACACTA
ATTAAAGCGAGAAATTGAAAGCCAAAGATATCAACGAATAATCTGATCCA
TACGTAAAGTGTGCCTACAGTTTGGCGATATAGGTTTGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGGCGGGCCCAGGTAGTGGTCATAATCCAAATCAT
AATCATATCATAATCCAC
FMO07032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syt7-RM | 2830 | CG2381-RM | 123..1098 | 6..980 | 4765 | 99.4 | Plus |
| Syt7-RA | 2794 | CG2381-RA | 88..1062 | 7..980 | 4760 | 99.4 | Plus |
| Syt7-RB | 2684 | CG2381-RB | 43..1017 | 7..980 | 4760 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 282434..282738 | 697..393 | 1525 | 100 | Minus |
| 4 | 1348131 | 4 | 305015..305179 | 170..6 | 825 | 100 | Minus |
| 4 | 1348131 | 4 | 281724..281894 | 945..775 | 730 | 97.7 | Minus |
| 4 | 1348131 | 4 | 302386..302527 | 310..169 | 710 | 100 | Minus |
| 4 | 1348131 | 4 | 281946..282028 | 778..696 | 415 | 100 | Minus |
| 4 | 1348131 | 4 | 302242..302324 | 392..310 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:57:38 has no hits.
FMO07032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:31 Download gff for
FMO07032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt7-RB | 37..1028 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:25 Download gff for
FMO07032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt7-RH | 99..1088 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:21 Download gff for
FMO07032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syt7-RM | 119..1098 | 1..980 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:21 Download gff for
FMO07032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 280502..280537 | 946..980 | 94 | <- | Minus |
| 4 | 281724..281892 | 777..945 | 97 | <- | Minus |
| 4 | 281948..282028 | 696..776 | 100 | <- | Minus |
| 4 | 282436..282738 | 393..695 | 100 | <- | Minus |
| 4 | 302242..302323 | 311..392 | 100 | <- | Minus |
| 4 | 302386..302526 | 170..310 | 100 | <- | Minus |
| 4 | 305016..305181 | 1..169 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:31 Download gff for
FMO07032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 301128..301163 | 946..980 | 94 | <- | Minus |
| arm_4 | 302350..302518 | 777..945 | 97 | <- | Minus |
| arm_4 | 302574..302654 | 696..776 | 100 | <- | Minus |
| arm_4 | 303062..303364 | 393..695 | 100 | <- | Minus |
| arm_4 | 322868..322949 | 311..392 | 100 | <- | Minus |
| arm_4 | 323012..323152 | 170..310 | 100 | <- | Minus |
| arm_4 | 325642..325807 | 1..169 | 98 | | Minus |
