Clone FMO07038 Report

Search the DGRC for FMO07038

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:70
Well:38
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8993-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07038.5prime Sequence

452 bp (452 high quality bases) assembled on 2008-10-03

> FMO07038.5prime
CAGTCGACATGCAGCGACAGATTATTAACATTCTGGGACAGACGACGCGT
CGCCTGGCTAGCGGCCAGCAAATTCGCATGCTGTCAGTTTCTGCGCCGCG
ACAGGAGATCTTCAAAGTCCAGAGCGCCGAGGACTTTGACAAGAAAGTAA
AGAACAGCCAGCAGCCCGTGATTGTGGACTTCTTCGCAACCTGGTGCAAT
CCCTGCAAGCTGCTAACCCCGCGCATCGAGAGTATTGTGGGCGAACAGGC
CGGTTCCATCAAGCTGGCCAAGGTGGACATAGATGAGCACAGCGAACTGG
CTCTGGACTACGATGTGGCCGCCGTGCCCGTGCTAGTGGTGCTGCAGAAC
GGCAAGGAGGTGCAGCGCATGGTGGGACTCCAGGACGAGGACAAAATCCG
GGCCTGGGTTGCCGCCGCCGTCAAACAGGCCAAGGCAAGCTTTCTAGACC
AT

FMO07038.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG8993-RA 616 CG8993-RA 83..509 8..434 2135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2372526..2372769 191..434 1220 100 Plus
3L 28110227 3L 2372281..2372463 8..190 915 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:56 has no hits.

FMO07038.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:18 Download gff for FMO07038.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8993-RA 79..512 1..438 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:56 Download gff for FMO07038.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8993-RA 79..512 1..438 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:04 Download gff for FMO07038.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8993-RA 79..512 1..438 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:04 Download gff for FMO07038.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2372277..2372463 1..190 97 -> Plus
3L 2372526..2372772 191..438 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:18 Download gff for FMO07038.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2372277..2372463 1..190 97 -> Plus
arm_3L 2372526..2372772 191..438 99   Plus