FMO07041.5prime Sequence
1141 bp (1014 high quality bases) assembled on 2008-10-03
> FMO07041.5prime
CAGTCGACATGGGAGCCACTAGTGTCGGAGTTCCAGTCTGGAAGATTCAG
CTACTGATTCTGCTGAGTGCAGTTGTTCTCACCATTCAAGCTGCTCCTGT
CGAGGTAACCGAAGGAGTGACCCAACCCCCAGCCGAGAAGCTGCAAACGG
AGTCTCGTTCCCGTAAAGATGAAGAGCTGGAACTAGAAGAAGACCTGGAT
GGACGTAATGCCTATATCAACAATCAGTTTGTGCCAAGCGAACCTGCAGA
AGTCCTAGAGGATGTGCAGAATACGCCGCTCTACGAGATCCTTCAAAAGC
AGATGGAACAAGTGTTGGCCTCATCGGCTCCCAATGACCCTGTCTACGAG
CAGCACCGCGAGAAGCAGGATCGTCGCGATCAGAAACCACCACACCAGCC
ACCGTACTTCTCCGGCGGAGATCGAGATGGTGATCTACAGGATGACTACG
AGGACGAGGAGGATCAGACGGATCAGGGTTATCCGTCGGACCCCGAGAAA
CCGGACGCCGTGTCAGATGCTCCCGAGGATGAGGACCCAGGCTACCAGGC
ACCTTCGTTGAGCCTTCCAACCACCACCACTCGCAAACCGTACAGACGAC
GCAGCACAACCACTTTTCAGCCACGAACCACCAGGACAAGAACCACTGCT
CAGCCCAGGATCTCGGAAAGTCCATTGAACCAAACCAGCACCACAGAGCA
ATCACCAAATGTGACCACCAGCACTCCACGGCCCAAGATTGGTTCCAGCA
CCAAACCCAAAGCAAATCCTCAGCCGGGAAACAGCCTGCCAAGTGACCCG
CAGTTTACAAGCACAAGCGTCGCATCATCTTCAAGACCATCTCAACGGGC
TCGCAATTCGTCAACTCGCCAATTGGCGACCTAATGATCAGTTCTCAATC
GGATTGCCAAGCCAACCACTCCGGGTGGAGCTACCAGCACTGCGGTTCAC
ATAGTTCGTCCAGCGAGGCTTTACGGTGCTCTTTCGCAAACTTAATTCGA
AATTTTGAACTTCAACACTAGAAGAGCCATAAAGTCCAAAAATATGCAAG
CTTTCTAGAACATCGTTGGGCGCGCGGCCCAGGTAAATGCCCTATCTATC
CTAATCATAATCATATTCCAACTAGCCTAGAAATCTGTCAT
FMO07041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14110-RA | 1085 | CG14110-RA | 23..1066 | 9..1045 | 4925 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13384925..13385873 | 71..1015 | 4405 | 99.1 | Plus |
| 3L | 28110227 | 3L | 13384811..13384874 | 9..72 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:28 has no hits.
FMO07041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:26 Download gff for
FMO07041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 18..1066 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:59 Download gff for
FMO07041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 16..1064 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:53 Download gff for
FMO07041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 18..1066 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:53 Download gff for
FMO07041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13384806..13384874 | 1..72 | 94 | -> | Plus |
| 3L | 13384927..13385873 | 73..1015 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:26 Download gff for
FMO07041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13377906..13377974 | 1..72 | 94 | -> | Plus |
| arm_3L | 13378027..13378973 | 73..1015 | 99 | == | Plus |
