FMO07042.5prime Sequence
464 bp (464 high quality bases) assembled on 2008-10-03
> FMO07042.5prime
CAGTCGACATGATTGACCAGCACAAGCGCAGCCACAAATCAGAGAAATCC
AGTCGCAAGTCGGGAAAGAAACATTCCGACAAACCACACAAGGTGAAGAC
CCACGATCCGCTCAAGAAACAAAAGAAGCGGGCTCTAAAGAAGCTCCGCC
GCAAGTCCGCCACCGTGAATTTCCCGTACCAACTCTTCTTGTACCGCCAA
GAACTAAGGCGGGCCAGCGCCGACTTTTCCTATCTCCGGCTGTCCAAGGC
CAAGATAGTGCTTACCTCCCAACTAATCGCCAAGAAGATGGGCAGCTGCA
ATCCCGATTGCAGCGTGGACGAGCTTAAGGAACTCAGCCGCGAGGTGCAG
TTCCAGAAACGCCTCTGCCATCAAGTGGAGCGCCTGCAGCAATTCCGGCA
ACTGGGACTCACCGAGATGATCCTCAACGGCAAGAAGACGACGCTGGCAA
GCTTTCTAGACCAT
FMO07042.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SNCF-RA | 608 | CG14112-RA | 39..477 | 8..446 | 2195 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13378621..13379059 | 8..446 | 2195 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:46:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 2765..2820 | 35..90 | 109 | 66.1 | Plus |
FMO07042.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:26 Download gff for
FMO07042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 34..483 | 1..453 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-17 12:33:59 Download gff for
FMO07042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 32..481 | 1..453 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:48 Download gff for
FMO07042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 34..483 | 1..453 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:48 Download gff for
FMO07042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13378616..13379065 | 1..453 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:26 Download gff for
FMO07042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13371716..13372165 | 1..453 | 98 | | Plus |
