FMO07043.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-10-03
> FMO07043.5prime
CAGTCGACATGGAATCGCCAGTGGTAAACGAAGTTGCAGCCAGCTTGGGC
GGTGAAAAGCTGGAGGTCTTTCGCAAGCTGAACCTCCTGGAACAGCATCG
CGTGGAGAGCTACAAGAGTTGGCCCTTTCCGGAGACCGCATCCTGCAGCA
TTTCGAAGATGGCCGAGGCGGGATTCTATTGGACGGGCACCAAGCGGGAA
AACGACACTGCCACTTGTTTTGTGTGCGGAAAGACCCTGGATGGCTGGGA
GCCCGAAGATGATCCGTGGAAGGAGCACGTGAAACATGCACCCCAATGCG
AGTTCGCCAAGCTATCGTGTCCCGAAAGGAATTTAACCGTATCACAATTT
CTGGAAATTCTTGGAACCGTCGTTAAAGGCAGCATAGAGAAAACCTGCAA
AGCCTTCAAATCGAGCTTCGTTCGGGAGAATGAGAAGCGTCTAGATGAGT
TTACGCGTAATCAAAAAGCAAGCTTTCTAGACCAT
FMO07043.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Det-RA | 651 | CG12265-RA | 105..563 | 9..467 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17149996..17150181 | 157..342 | 930 | 100 | Plus |
| 3R | 32079331 | 3R | 17149771..17149920 | 9..158 | 750 | 100 | Plus |
| 3R | 32079331 | 3R | 17150239..17150367 | 339..467 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:58:26 has no hits.
FMO07043.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:41 Download gff for
FMO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Det-RA | 99..569 | 1..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:35 Download gff for
FMO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Det-RA | 99..569 | 1..473 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:35 Download gff for
FMO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17149998..17150177 | 159..338 | 100 | -> | Plus |
| 3R | 17150239..17150373 | 339..473 | 97 | | Plus |
| 3R | 17149765..17149920 | 1..158 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:41 Download gff for
FMO07043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12975720..12975899 | 159..338 | 100 | -> | Plus |
| arm_3R | 12975961..12976095 | 339..473 | 97 | | Plus |
| arm_3R | 12975487..12975642 | 1..158 | 97 | -> | Plus |
